CYL3_ORYSJ
ID CYL3_ORYSJ Reviewed; 270 AA.
AC Q0J6H8; Q6Z0P1;
DT 25-APR-2018, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Cyclase-like protein 3 {ECO:0000303|PubMed:25974367};
DE Short=OsCYL3 {ECO:0000303|PubMed:25974367};
DE Flags: Precursor;
GN Name=CYL3 {ECO:0000303|PubMed:25974367};
GN OrderedLocusNames=Os08g0319900 {ECO:0000312|EMBL:BAT04864.1},
GN LOC_Os08g23100 {ECO:0000305};
GN ORFNames=OJ1136_D12.114 {ECO:0000312|EMBL:BAD10424.1},
GN P0465H09.131 {ECO:0000312|EMBL:BAC92446.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP TISSUE SPECIFICITY, INDUCTION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=25974367; DOI=10.1016/j.jplph.2015.03.018;
RA Qin Y., Shen X., Wang N., Ding X.;
RT "Characterization of a novel cyclase-like gene family involved in
RT controlling stress tolerance in rice.";
RL J. Plant Physiol. 181:30-41(2015).
CC -!- FUNCTION: May be involved in response to stresses.
CC {ECO:0000250|UniProtKB:Q6YX89}.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix {ECO:0000250|UniProtKB:Q6YX89}.
CC -!- TISSUE SPECIFICITY: Highly expressed in leaf sheaths. leaf collars and
CC flag leaves. Expressed in roots, stems, glumes, young panicles and
CC pistils. {ECO:0000269|PubMed:25974367}.
CC -!- INDUCTION: Induced by cold, salt and drought stresses. Induced by
CC abscisic acid, auxine, brassinosteroid, ethylene, gibberellin,
CC jasmonate, kinetin, reactive oxygen species and salicylate.
CC -!- SIMILARITY: Belongs to the Cyclase 1 superfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAC92446.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAD10424.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AP004561; BAC92446.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP005485; BAD10424.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP008214; BAF23437.1; -; Genomic_DNA.
DR EMBL; AP014964; BAT04864.1; -; Genomic_DNA.
DR EMBL; AK108030; BAG98257.1; -; mRNA.
DR RefSeq; XP_015650260.1; XM_015794774.1.
DR RefSeq; XP_015650261.1; XM_015794775.1.
DR AlphaFoldDB; Q0J6H8; -.
DR SMR; Q0J6H8; -.
DR STRING; 4530.OS08T0319900-01; -.
DR PaxDb; Q0J6H8; -.
DR PRIDE; Q0J6H8; -.
DR EnsemblPlants; Os08t0319900-01; Os08t0319900-01; Os08g0319900.
DR GeneID; 4345252; -.
DR Gramene; Os08t0319900-01; Os08t0319900-01; Os08g0319900.
DR KEGG; osa:4345252; -.
DR eggNOG; ENOG502QRBQ; Eukaryota.
DR HOGENOM; CLU_030671_4_1_1; -.
DR InParanoid; Q0J6H8; -.
DR OMA; GHPTHKT; -.
DR OrthoDB; 1264549at2759; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0004061; F:arylformamidase activity; IBA:GO_Central.
DR GO; GO:0019441; P:tryptophan catabolic process to kynurenine; IBA:GO_Central.
DR Gene3D; 3.50.30.50; -; 1.
DR InterPro; IPR007325; KFase/CYL.
DR InterPro; IPR037175; KFase_sf.
DR PANTHER; PTHR31118; PTHR31118; 1.
DR Pfam; PF04199; Cyclase; 1.
DR SUPFAM; SSF102198; SSF102198; 1.
PE 2: Evidence at transcript level;
KW Extracellular matrix; Reference proteome; Secreted; Signal;
KW Stress response.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..270
FT /note="Cyclase-like protein 3"
FT /id="PRO_5011945524"
SQ SEQUENCE 270 AA; 30089 MW; B7A0679A65803ABD CRC64;
MMAHLAPLFL LLLLLLLPLH AAATPSAHPA YPNEPPSCAA AVPVPERREA HGGGRILDIT
HYYREDMPSW ESDGGVGQFL WLPASMRNGS RANNSEMRLP THTGTHVDAP GHVFQHYFDA
GFDVDSLDLE VLNGLALLVD VPRDDNITAK MMESLHIPKG IQRVLFRTLN TDRQLMWKKE
FDTSYVGFME DGAQWLVDNT DIKLVGIDYL SVAAFDDLIP SHLVLLKNRD IILVEGLKLE
NIMPGIYSLH CLPLRLRGAE GSPIRCILIK