CYBH_BRADU
ID CYBH_BRADU Reviewed; 247 AA.
AC P21960; Q45248;
DT 01-AUG-1991, integrated into UniProtKB/Swiss-Prot.
DT 28-FEB-2003, sequence version 3.
DT 25-MAY-2022, entry version 126.
DE RecName: Full=Probable Ni/Fe-hydrogenase B-type cytochrome subunit;
GN Name=hupC; OrderedLocusNames=bll6940;
OS Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 /
OS NBRC 14792 / USDA 110).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Bradyrhizobium.
OX NCBI_TaxID=224911;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8230232; DOI=10.1006/jmbi.1993.1605;
RA van Soom C., Browaeys J., Verreth C., Vanderleyden J.;
RT "Nucleotide sequence analysis of four genes, hupC, hupD, hupF and hupG,
RT downstream of the hydrogenase structural genes in Bradyrhizobium
RT japonicum.";
RL J. Mol. Biol. 234:508-512(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110;
RX PubMed=8163174; DOI=10.1016/0378-1119(94)90126-0;
RA Fu C., Maier R.J.;
RT "Sequence and characterization of three genes within the hydrogenase gene
RT cluster of Bradyrhizobium japonicum.";
RL Gene 141:47-52(1994).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110;
RX PubMed=12597275; DOI=10.1093/dnares/9.6.189;
RA Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S.,
RA Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M.,
RA Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
RT "Complete genomic sequence of nitrogen-fixing symbiotic bacterium
RT Bradyrhizobium japonicum USDA110.";
RL DNA Res. 9:189-197(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-111.
RX PubMed=3054886; DOI=10.1073/pnas.85.22.8395;
RA Sayavedra-Soto L.A., Powell G.K., Evans H.J., Morris R.O.;
RT "Nucleotide sequence of the genetic loci encoding subunits of
RT Bradyrhizobium japonicum uptake hydrogenase.";
RL Proc. Natl. Acad. Sci. U.S.A. 85:8395-8399(1988).
CC -!- FUNCTION: B-type cytochrome involved in electron transfer from
CC hydrogenase to oxygen. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the HupC/HyaC/HydC family. {ECO:0000305}.
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DR EMBL; Z21948; CAA79943.1; -; Genomic_DNA.
DR EMBL; L24446; AAD13468.1; -; Genomic_DNA.
DR EMBL; BA000040; BAC52205.1; -; Genomic_DNA.
DR EMBL; J04114; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; S39400; S39400.
DR RefSeq; NP_773580.1; NC_004463.1.
DR RefSeq; WP_011089678.1; NZ_CP011360.1.
DR AlphaFoldDB; P21960; -.
DR STRING; 224911.27355221; -.
DR EnsemblBacteria; BAC52205; BAC52205; BAC52205.
DR GeneID; 64026696; -.
DR KEGG; bja:bll6940; -.
DR PATRIC; fig|224911.44.peg.6974; -.
DR eggNOG; COG1969; Bacteria.
DR HOGENOM; CLU_075520_0_0_5; -.
DR InParanoid; P21960; -.
DR OMA; FYIAYPF; -.
DR PhylomeDB; P21960; -.
DR Proteomes; UP000002526; Chromosome.
DR GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IBA:GO_Central.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0022904; P:respiratory electron transport chain; IEA:InterPro.
DR InterPro; IPR011577; Cyt_b561_bac/Ni-Hgenase.
DR InterPro; IPR016174; Di-haem_cyt_TM.
DR InterPro; IPR000516; Ni-dep_Hydgase_cyt-B.
DR Pfam; PF01292; Ni_hydr_CYTB; 1.
DR PRINTS; PR00161; NIHGNASECYTB.
DR SUPFAM; SSF81342; SSF81342; 1.
DR TIGRFAMs; TIGR02125; CytB-hydogenase; 1.
DR PROSITE; PS00882; NI_HGENASE_CYTB_1; 1.
DR PROSITE; PS00883; NI_HGENASE_CYTB_2; 1.
PE 3: Inferred from homology;
KW Cell membrane; Electron transport; Heme; Iron; Membrane; Metal-binding;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..247
FT /note="Probable Ni/Fe-hydrogenase B-type cytochrome
FT subunit"
FT /id="PRO_0000201381"
FT TRANSMEM 42..62
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 86..106
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 154..174
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 204..224
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CONFLICT 12
FT /note="G -> R (in Ref. 1 and 4)"
FT /evidence="ECO:0000305"
FT CONFLICT 17..20
FT /note="AIAA -> SR (in Ref. 1 and 4)"
FT /evidence="ECO:0000305"
FT CONFLICT 194..201
FT /note="IWPNSQDV -> SGRQPGR (in Ref. 1; CAA79943)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 247 AA; 28032 MW; 4E677313D72B2422 CRC64;
MMDAVAPASD AGPDLAAIAA DASGERAVGR PTVYVYEAPV RICHWVNAFS IIVLMVTGYL
IGTPLPTVAG EASDNFVMGY IRFAHFAAGQ VLAVFFLTRI LWAFVGNHHS RQIFYIPVHR
KQFWKEVLHE IRWYAFLERE PKMYVGHNPL AQTAMFTGFT LFVAFMIVTG FALYSEGQGI
DSWQHKLFGW VFAIWPNSQD VHTWHHLGMW ALVVFVMVHI YAAVREDIMS RQSIISSMIS
GERQFRD
