COPB_TRYBB
ID COPB_TRYBB Reviewed; 982 AA.
AC Q9NFU6;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 61.
DE RecName: Full=Coatomer subunit beta {ECO:0000250|UniProtKB:P23514};
DE AltName: Full=Beta-coat protein {ECO:0000250|UniProtKB:P23514};
DE Short=Beta-COP {ECO:0000250|UniProtKB:P23514};
OS Trypanosoma brucei brucei.
OC Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina;
OC Trypanosomatida; Trypanosomatidae; Trypanosoma.
OX NCBI_TaxID=5702;
RN [1] {ECO:0000312|EMBL:CAB87383.1}
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND SUBCELLULAR LOCATION.
RX PubMed=11377739; DOI=10.1016/s0166-6851(01)00268-7;
RA Maier A.G., Webb H., Ding M., Bremser M., Carrington M., Clayton C.;
RT "The coatomer of Trypanosoma brucei.";
RL Mol. Biochem. Parasitol. 115:55-61(2001).
CC -!- FUNCTION: The coatomer is a cytosolic protein complex that binds to
CC dilysine motifs and reversibly associates with Golgi non-clathrin-
CC coated vesicles, which further mediate biosynthetic protein transport
CC from the ER, via the Golgi up to the trans Golgi network. Coatomer
CC complex is required for budding from Golgi membranes, and is essential
CC for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
CC (By similarity). {ECO:0000250|UniProtKB:P23514}.
CC -!- SUBUNIT: Oligomeric complex that consists of at least the alpha, beta,
CC beta', gamma, delta, epsilon and zeta subunits.
CC {ECO:0000250|UniProtKB:A0JN39}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:11377739}. Golgi
CC apparatus membrane {ECO:0000250|UniProtKB:P23514}; Peripheral membrane
CC protein {ECO:0000250|UniProtKB:P23514}; Cytoplasmic side
CC {ECO:0000250|UniProtKB:P23514}. Cytoplasmic vesicle, COPI-coated
CC vesicle membrane {ECO:0000250|UniProtKB:P23514}; Peripheral membrane
CC protein {ECO:0000250|UniProtKB:P23514}; Cytoplasmic side
CC {ECO:0000250|UniProtKB:P23514}. Note=The coatomer is cytoplasmic or
CC polymerized on the cytoplasmic side of the Golgi, as well as on the
CC vesicles/buds originating from it. {ECO:0000250|UniProtKB:P23514}.
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DR EMBL; AJ271083; CAB87383.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9NFU6; -.
DR SMR; Q9NFU6; -.
DR GO; GO:0030126; C:COPI vesicle coat; IEA:InterPro.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR002553; Clathrin/coatomer_adapt-like_N.
DR InterPro; IPR011710; Coatomer_bsu_C.
DR InterPro; IPR016460; COPB1.
DR InterPro; IPR029446; COPB1_appendage_platform_dom.
DR PANTHER; PTHR10635; PTHR10635; 1.
DR Pfam; PF01602; Adaptin_N; 1.
DR Pfam; PF07718; Coatamer_beta_C; 1.
DR Pfam; PF14806; Coatomer_b_Cpla; 1.
DR PIRSF; PIRSF005727; Coatomer_beta_subunit; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Cytoplasmic vesicle; ER-Golgi transport; Golgi apparatus;
KW Membrane; Protein transport; Repeat; Transport.
FT CHAIN 1..982
FT /note="Coatomer subunit beta"
FT /id="PRO_0000408948"
FT REPEAT 16..53
FT /note="HEAT 1"
FT /evidence="ECO:0000255"
FT REPEAT 130..167
FT /note="HEAT 2"
FT /evidence="ECO:0000255"
FT REPEAT 241..278
FT /note="HEAT 3"
FT /evidence="ECO:0000255"
FT REPEAT 317..352
FT /note="HEAT 4"
FT /evidence="ECO:0000255"
SQ SEQUENCE 982 AA; 110021 MW; 9A52B163617CCBD9 CRC64;
MEAKAEGFCS FLVGLSGAPV NSKELKSALE KGDMKARASA LEALIRMHLN GEPQNHMIMT
VIKFITPLDD HYIKKLVLYF WEVVDKTDAS GKLLSEMILI CSFLREDLLH PNEYIRGLAL
RFMCKVKERE LVEPLVSSVV QNLTHRVTYV RRNAVLAVHR IFKRFPELLP DAAELVEKFI
SEENDVSASR NAFEMLVECS PDRVVKFLAE LRESKNLESL GATLQMSIVD FAGHMIRANP
YDKGRYVTVL FSILQSNNPA VRYQCASTLL SISTSPTAIR QAALTFIDLL KTHTDISVRL
IVVDQLDAMR ERFSKILQDS LLDILSVLAN GTMEIRKRIV TLGVELVSNQ NSEVFVQAIK
KELYWVKNEC DVDDKESLLE YKKLLIRATR TAVARRPHMA SAVIPLVLEY LYEEDDSGFE
VVSLIREVLQ LQPSLRSETL RQLRQTLRMI RCPSVIRTVL WLLGTHVTSA DDALEVIRLL
INTLEPLPLE PTVKEQMKQQ EDFDGHKGGQ QKPRMQMTTI VQEDGTYVMS SVPSNKTQED
AEGNDSNCGL RGVLTGGKFF IAAPLASTLS KLIIRLFNHH SSGVDESTMK EAQNSAIMLL
NEVLRFCTMD GAAGMIDDAT HEQIRLALLN ITNPRSPLLA TFVEDSSKAL DSLTNKVGSI
AGGDGFDFNK RNNDNVVGRT SFDEQQVALC SVDTPVMFTQ IMEGKGSLLE LEAVDDLGSV
VANASIEKTE EFLIKLEKTV PLSGFCDPLY CEASVTVHQF DITVDWYIAN CTANVLRDVS
IELTPLGSMK LCERPQVHTI QPHGSVRIRT ALKVGSPETG VICASVLYEG PQNERGCVVL
NNVRVDIMNY VRPAKCSASE FRDKWCKYDW ENAVAIRTEK TDMREYVEYV MQGTNTRLLE
PYPEEDDEVV SAFDGKGDNG HRYVSCNMYA RTLFGDDALL NVSIERDAEG KLSGMVRVRA
NKRPVAYGFG EKLNILNRRI VS