COBQ_RHOCA
ID COBQ_RHOCA Reviewed; 483 AA.
AC P0CY57; O68093; Q52686;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 25-MAY-2022, entry version 32.
DE RecName: Full=Cobyric acid synthase;
GN Name=cobQ;
OS Rhodobacter capsulatus (Rhodopseudomonas capsulata).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Rhodobacter.
OX NCBI_TaxID=1061;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 33303 / B10;
RX PubMed=7635831; DOI=10.1128/jb.177.15.4481-4487.1995;
RA Pollich M., Klug G.;
RT "Identification and sequence analysis of genes involved in late steps in
RT cobalamin (vitamin B12) synthesis in Rhodobacter capsulatus.";
RL J. Bacteriol. 177:4481-4487(1995).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation (By
CC similarity). {ECO:0000250}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000305}.
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DR EMBL; Z46611; CAA86584.1; -; Genomic_DNA.
DR PIR; S52226; S52226.
DR AlphaFoldDB; P0CY57; -.
DR UniPathway; UPA00148; -.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase.
FT CHAIN 1..483
FT /note="Cobyric acid synthase"
FT /id="PRO_0000141327"
FT DOMAIN 248..437
FT /note="GATase cobBQ-type"
FT ACT_SITE 330
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 429
FT /evidence="ECO:0000250"
SQ SEQUENCE 483 AA; 50410 MW; 000B7D4DD466130B CRC64;
MTALMIQGAG SNVGKSMLVA GLCRAARRRG LTVAPFKPQN MSNNAAVTAD GGEIGRAQAL
QALACGLEPV TDMNPILLKP ESDVGAQVVV QGKRLTTTRA RDYATLKPQL MGAVLESFNR
LKATHDLVIV EGAGSPAEVN LRAGDIANMG FARAADVPVV LVGDIDRGGV IAQIVGTQAV
LDPADAEMIS GFLINKFRGD VTLFDDGYRL IGARTGWRGF GTLPWFPLAH KLPAEDALDI
ASGPATGGTV IACLTLSRIA NFDDLDPLAA EPGVRMVMVQ PGQPIPAEAR LVILPGSKST
RGDLAFLREQ GWDIDLAAHV RRGGHVLGIC GGYQMLGRSV ADPEGIEGPA GTTPGLGLLD
VETVMTPDKR LTRVRVRATH AGSGLAVEGY EIHIGRTEGA DRARPFAIVE GQNEGAMSAD
GRVIGSYLHG LFGADAFRAA FLRGLGIRAS GQSHAAGVEA ALDALADHLE THLDVTGILA
LAR