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CLAP2_RAT
ID   CLAP2_RAT               Reviewed;        1286 AA.
AC   Q99JD4;
DT   11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2001, sequence version 1.
DT   03-AUG-2022, entry version 142.
DE   RecName: Full=CLIP-associating protein 2;
DE   AltName: Full=Cytoplasmic linker-associated protein 2;
GN   Name=Clasp2;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RX   PubMed=11290329; DOI=10.1016/s0092-8674(01)00288-4;
RA   Akhmanova A., Hoogenraad C.C., Drabek K., Stepanova T., Dortland B.,
RA   Verkerk T., Vermeulen W., Burgering B.M., de Zeeuw C.I., Grosveld F.,
RA   Galjart N.;
RT   "Clasps are CLIP-115 and -170 associating proteins involved in the regional
RT   regulation of microtubule dynamics in motile fibroblasts.";
RL   Cell 104:923-935(2001).
RN   [2]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-14; SER-20; SER-333; SER-413;
RP   SER-535; SER-581 AND SER-947, AND IDENTIFICATION BY MASS SPECTROMETRY
RP   [LARGE SCALE ANALYSIS].
RX   PubMed=22673903; DOI=10.1038/ncomms1871;
RA   Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C.,
RA   Olsen J.V.;
RT   "Quantitative maps of protein phosphorylation sites across 14 different rat
RT   organs and tissues.";
RL   Nat. Commun. 3:876-876(2012).
CC   -!- FUNCTION: Microtubule plus-end tracking protein that promotes the
CC       stabilization of dynamic microtubules. Involved in the nucleation of
CC       noncentrosomal microtubules originating from the trans-Golgi network
CC       (TGN). Required for the polarization of the cytoplasmic microtubule
CC       arrays in migrating cells towards the leading edge of the cell. May act
CC       at the cell cortex to enhance the frequency of rescue of depolymerizing
CC       microtubules by attaching their plus-ends to cortical platforms
CC       composed of ERC1 and PHLDB2. This cortical microtubule stabilizing
CC       activity is regulated at least in part by phosphatidylinositol 3-kinase
CC       signaling. Also performs a similar stabilizing function at the
CC       kinetochore which is essential for the bipolar alignment of chromosomes
CC       on the mitotic spindle. Acts as a mediator of ERBB2-dependent
CC       stabilization of microtubules at the cell cortex.
CC       {ECO:0000250|UniProtKB:O75122}.
CC   -!- SUBUNIT: Interacts with microtubules. Interacts with MAPRE1; probably
CC       required for targeting to the growing microtubule plus ends. Interacts
CC       with CLIP2, ERC1, MAPRE3, PHLDB2 and RSN. The interaction with ERC1 may
CC       be mediated by PHLDB2. Interacts with GCC2; recruits CLASP2 to Golgi
CC       membranes (By similarity). Interacts with MACF1 (By similarity).
CC       {ECO:0000250|UniProtKB:O75122, ECO:0000250|UniProtKB:Q8BRT1}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton
CC       {ECO:0000250|UniProtKB:O75122}. Cytoplasm, cytoskeleton, microtubule
CC       organizing center, centrosome {ECO:0000250|UniProtKB:O75122}.
CC       Chromosome, centromere, kinetochore {ECO:0000250|UniProtKB:O75122}.
CC       Cytoplasm, cytoskeleton, spindle {ECO:0000250|UniProtKB:O75122}. Golgi
CC       apparatus {ECO:0000250|UniProtKB:Q8BRT1}. Golgi apparatus, trans-Golgi
CC       network {ECO:0000250|UniProtKB:O75122}. Cell membrane
CC       {ECO:0000250|UniProtKB:O75122}. Cell projection, ruffle membrane
CC       {ECO:0000250|UniProtKB:O75122}. Note=Localizes to microtubule plus
CC       ends. Localizes to centrosomes, kinetochores and the mitotic spindle
CC       from prometaphase. Subsequently localizes to the spindle midzone from
CC       anaphase and to the midbody from telophase. In migrating cells
CC       localizes to the plus ends of microtubules within the cell body and to
CC       the entire microtubule lattice within the lamella. Localizes to the
CC       cell cortex and this requires ERC1 and PHLDB2. The MEMO1-RHOA-DIAPH1
CC       signaling pathway controls localization of the phosphorylated form to
CC       the cell membrane (By similarity). {ECO:0000250|UniProtKB:O75122}.
CC   -!- DOMAIN: The two SXIP sequence motifs mediate interaction with MAPRE1;
CC       this is necessary for targeting to the growing microtubule plus ends.
CC       {ECO:0000250|UniProtKB:O75122}.
CC   -!- DOMAIN: Two TOG regions display structural characteristics similar to
CC       HEAT repeat domains and mediate interaction with microtubules.
CC       {ECO:0000250|UniProtKB:O75122}.
CC   -!- PTM: Phosphorylated by GSK3B. Phosphorylation by GSK3B may negatively
CC       regulate binding to microtubule lattices in lamella.
CC   -!- SIMILARITY: Belongs to the CLASP family. {ECO:0000305}.
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DR   EMBL; AJ288060; CAC35166.1; -; mRNA.
DR   RefSeq; NP_446174.1; NM_053722.2.
DR   AlphaFoldDB; Q99JD4; -.
DR   BioGRID; 250360; 4.
DR   IntAct; Q99JD4; 2.
DR   MINT; Q99JD4; -.
DR   STRING; 10116.ENSRNOP00000012545; -.
DR   iPTMnet; Q99JD4; -.
DR   PhosphoSitePlus; Q99JD4; -.
DR   jPOST; Q99JD4; -.
DR   PaxDb; Q99JD4; -.
DR   PRIDE; Q99JD4; -.
DR   GeneID; 114514; -.
DR   KEGG; rno:114514; -.
DR   UCSC; RGD:619789; rat.
DR   CTD; 23122; -.
DR   RGD; 619789; Clasp2.
DR   VEuPathDB; HostDB:ENSRNOG00000009161; -.
DR   eggNOG; KOG2956; Eukaryota.
DR   HOGENOM; CLU_005060_0_0_1; -.
DR   InParanoid; Q99JD4; -.
DR   OrthoDB; 66632at2759; -.
DR   Reactome; R-RNO-141444; Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal.
DR   Reactome; R-RNO-2467813; Separation of Sister Chromatids.
DR   Reactome; R-RNO-2500257; Resolution of Sister Chromatid Cohesion.
DR   Reactome; R-RNO-5663220; RHO GTPases Activate Formins.
DR   Reactome; R-RNO-68877; Mitotic Prometaphase.
DR   Reactome; R-RNO-9648025; EML4 and NUDC in mitotic spindle formation.
DR   PRO; PR:Q99JD4; -.
DR   Proteomes; UP000002494; Chromosome 8.
DR   Bgee; ENSRNOG00000009161; Expressed in cerebellum and 20 other tissues.
DR   ExpressionAtlas; Q99JD4; baseline and differential.
DR   Genevisible; Q99JD4; RN.
DR   GO; GO:0045180; C:basal cortex; ISO:RGD.
DR   GO; GO:0005938; C:cell cortex; ISO:RGD.
DR   GO; GO:0031252; C:cell leading edge; ISS:UniProtKB.
DR   GO; GO:0005881; C:cytoplasmic microtubule; ISS:UniProtKB.
DR   GO; GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
DR   GO; GO:0000776; C:kinetochore; IBA:GO_Central.
DR   GO; GO:0005874; C:microtubule; IDA:RGD.
DR   GO; GO:0015630; C:microtubule cytoskeleton; ISO:RGD.
DR   GO; GO:0005815; C:microtubule organizing center; IBA:GO_Central.
DR   GO; GO:0072686; C:mitotic spindle; IBA:GO_Central.
DR   GO; GO:0005886; C:plasma membrane; ISS:UniProtKB.
DR   GO; GO:0032587; C:ruffle membrane; IDA:RGD.
DR   GO; GO:0005876; C:spindle microtubule; IBA:GO_Central.
DR   GO; GO:0005802; C:trans-Golgi network; ISS:UniProtKB.
DR   GO; GO:0002162; F:dystroglycan binding; ISO:RGD.
DR   GO; GO:0008017; F:microtubule binding; IDA:RGD.
DR   GO; GO:0051010; F:microtubule plus-end binding; ISS:UniProtKB.
DR   GO; GO:1990782; F:protein tyrosine kinase binding; ISO:RGD.
DR   GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR   GO; GO:0016477; P:cell migration; ISO:RGD.
DR   GO; GO:0032869; P:cellular response to insulin stimulus; IEP:RGD.
DR   GO; GO:0040001; P:establishment of mitotic spindle localization; IBA:GO_Central.
DR   GO; GO:0007163; P:establishment or maintenance of cell polarity; ISO:RGD.
DR   GO; GO:0010458; P:exit from mitosis; ISS:UniProtKB.
DR   GO; GO:0007030; P:Golgi organization; ISS:UniProtKB.
DR   GO; GO:0034453; P:microtubule anchoring; ISS:UniProtKB.
DR   GO; GO:0000226; P:microtubule cytoskeleton organization; ISS:UniProtKB.
DR   GO; GO:0007020; P:microtubule nucleation; ISS:UniProtKB.
DR   GO; GO:0031023; P:microtubule organizing center organization; ISS:UniProtKB.
DR   GO; GO:0090307; P:mitotic spindle assembly; IBA:GO_Central.
DR   GO; GO:0007052; P:mitotic spindle organization; ISS:UniProtKB.
DR   GO; GO:0051895; P:negative regulation of focal adhesion assembly; ISO:RGD.
DR   GO; GO:0007026; P:negative regulation of microtubule depolymerization; IDA:RGD.
DR   GO; GO:0051497; P:negative regulation of stress fiber assembly; ISO:RGD.
DR   GO; GO:1903690; P:negative regulation of wound healing, spreading of epidermal cells; ISO:RGD.
DR   GO; GO:1904261; P:positive regulation of basement membrane assembly involved in embryonic body morphogenesis; ISO:RGD.
DR   GO; GO:0010634; P:positive regulation of epithelial cell migration; ISO:RGD.
DR   GO; GO:0045921; P:positive regulation of exocytosis; ISO:RGD.
DR   GO; GO:0090091; P:positive regulation of extracellular matrix disassembly; ISO:RGD.
DR   GO; GO:1905477; P:positive regulation of protein localization to membrane; IMP:RGD.
DR   GO; GO:0072659; P:protein localization to plasma membrane; ISO:RGD.
DR   GO; GO:0010717; P:regulation of epithelial to mesenchymal transition; ISO:RGD.
DR   GO; GO:0010470; P:regulation of gastrulation; ISO:RGD.
DR   GO; GO:0031110; P:regulation of microtubule polymerization or depolymerization; ISO:RGD.
DR   GO; GO:0032886; P:regulation of microtubule-based process; ISS:UniProtKB.
DR   GO; GO:0006903; P:vesicle targeting; ISO:RGD.
DR   Gene3D; 1.25.10.10; -; 3.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR024395; CLASP_N_dom.
DR   InterPro; IPR034085; TOG.
DR   Pfam; PF12348; CLASP_N; 1.
DR   SMART; SM01349; TOG; 3.
DR   SUPFAM; SSF48371; SSF48371; 1.
PE   1: Evidence at protein level;
KW   Cell cycle; Cell division; Cell membrane; Cell projection; Centromere;
KW   Chromosome; Cytoplasm; Cytoskeleton; Golgi apparatus; Kinetochore;
KW   Membrane; Microtubule; Mitosis; Phosphoprotein; Reference proteome; Repeat.
FT   CHAIN           1..1286
FT                   /note="CLIP-associating protein 2"
FT                   /id="PRO_0000089851"
FT   REPEAT          179..214
FT                   /note="HEAT 1"
FT                   /evidence="ECO:0000255"
FT   REPEAT          215..251
FT                   /note="HEAT 2"
FT                   /evidence="ECO:0000255"
FT   REPEAT          256..293
FT                   /note="HEAT 3"
FT                   /evidence="ECO:0000255"
FT   REPEAT          702..739
FT                   /note="HEAT 4"
FT                   /evidence="ECO:0000255"
FT   REPEAT          764..801
FT                   /note="HEAT 5"
FT                   /evidence="ECO:0000255"
FT   REPEAT          1046..1083
FT                   /note="HEAT 6"
FT                   /evidence="ECO:0000255"
FT   REPEAT          1090..1127
FT                   /note="HEAT 7"
FT                   /evidence="ECO:0000255"
FT   REPEAT          1208..1245
FT                   /note="HEAT 8"
FT                   /evidence="ECO:0000255"
FT   REGION          1..40
FT                   /note="Golgi localization"
FT                   /evidence="ECO:0000250"
FT   REGION          17..70
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          66..317
FT                   /note="TOG 1"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   REGION          320..350
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          355..374
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          410..473
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          450..565
FT                   /note="Interaction with microtubules, MAPRE1 and MAPRE3"
FT                   /evidence="ECO:0000250"
FT   REGION          492..566
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          606..638
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          642..873
FT                   /note="TOG 2"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   REGION          864..1286
FT                   /note="Interaction with RSN and localization to the Golgi
FT                   and kinetochores"
FT                   /evidence="ECO:0000250"
FT   REGION          870..920
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          944..990
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1009..1286
FT                   /note="Required for cortical localization"
FT                   /evidence="ECO:0000250"
FT   MOTIF           500..503
FT                   /note="SXIP motif 1; mediates interaction with MAPRE1 and
FT                   targeting to microtubule plus ends"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOTIF           523..526
FT                   /note="SXIP motif 2; mediates interaction with MAPRE1 and
FT                   targeting to microtubule plus ends"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   COMPBIAS        454..473
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        492..537
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        616..638
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        950..965
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         14
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         20
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         322
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         333
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         336
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         374
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q8BRT1"
FT   MOD_RES         376
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         413
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         461
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         465
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         469
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         484
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         495
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         513
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         531
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         535
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         570
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         572
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         581
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         614
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         620
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q8BRT1"
FT   MOD_RES         779
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         884
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         944
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         947
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         1005
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
FT   MOD_RES         1021
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O75122"
SQ   SEQUENCE   1286 AA;  140638 MW;  C1742635DADC3F09 CRC64;
     MRRLICKRIC DYKSFDDEES VDGNRPSSAA SAFKVPAPKT PGNPVNSARK PGSAGGPKAG
     GTSKEGGAGA VDEDDFIKAF TDVPSIQIYS SRELEETLNK IREILSDDKH DWDQRANALK
     KIRSLLVAGA AQYDCFFQHL RLLDGALKLS AKDLRSQVVR EACITVAHLS TVLGNKFDHG
     AEAIVPTLFN LVPNSAKVMA TSGCAAIRFI IRHTHVPRLI PLITSNCTSK SVPVRRRSFE
     FLDLLLQEWQ THSLERHAAV LVETIKKGIH DADAEARVEA RKTYMGLRNH FPGEAETLYN
     SLEPSYQKSL QTYLKSSGSV ASLPQSDRSS SSSQESLNRP FSSKWSTANP SAVAGRVSVG
     GSKASPLPGS LQRSRSDIDV NAAAGAKAHH AAGQAVRSGR LGAGALNPGS YASLEDTSDK
     MDGTASEDGR VRAKLSTPLV AVGNAKTDSR GRSRTKMVSQ SQPGSRSGSP GRVLTTTALS
     TVSSGAQRIL VNSASAQKRS KIPRSQGCSR EASPSRLSVA RSSRIPRPSV SQGCSREASR
     ESSRDTSPVR SFQPLGPGYG MSQSSRLSSS VSAMRVLNTG SDVEEAVADA LLLGDIRTKK
     KPARRRYESY GMHSDDDANS DASSACSERS YSSRNGSIPT YMRQTEDVAE VLNRCASSNW
     SERKEGLLGL QNLLKNQRTL SRVELKRLCE IFTRMFADPH GKVFSMFLET LVDFIQVHKD
     DLQDWLFVLL TQLLKKMGAD LLGSVQAKVQ KALDVTRESF PNDLQFNILM RFTVDQTQTP
     SLKVKVAILK YIETLAKQMD PGDFINSSET RLAVSRVITW TTEPKSSDVR KAAQSVLISL
     FELNTPEFTM LLGALPKTFQ DGATKLLHNH LRNTGNGTQS SMGSPLTRPT PRSPANWSSP
     LTSPTNTSQN TLSPSAFDYD TENMNSEDIY SSLRGVTEAI QNFSFRSQED MSEPLKRDPK
     KEDGDTVCSG PGMSDPRAGG DAPDSSQPAL DNKASLLHSV PLHSSPRSRD YNPYNYSDSI
     SPFNKSALKE AMFDDDADQF PDDLSLDHSD LVAELLKELS NHNERIEERK IALYELMKLT
     QEESFSVWDE HFKTILLLLL ETLGDKEPTI RALALKVLKE ILRHQPARFK NYAELTVMKT
     LEAHKDPHKE VVRSAEEAAS VLATSISPEQ CIKVLCPIIQ TADYPINLAA IKMQTKVIER
     VSKETLNLLL PEIMPGLIQG YDNSESSVRK ACVFCLVAVH AVIGDELKPH LSQLTGSKMK
     LLNLYIKRAQ TGSAGADPTT DVSGQS
 
 
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