YNDL_BACSU
ID YNDL_BACSU Reviewed; 252 AA.
AC O31815;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=UPF0714 protein YndL;
GN Name=yndL; OrderedLocusNames=BSU17820;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [2]
RP DEVELOPMENTAL STAGE.
RX PubMed=16385044; DOI=10.1128/jb.188.2.532-541.2006;
RA Silvaggi J.M., Perkins J.B., Losick R.;
RT "Genes for small, noncoding RNAs under sporulation control in Bacillus
RT subtilis.";
RL J. Bacteriol. 188:532-541(2006).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- DEVELOPMENTAL STAGE: Expressed during sporulation, and this requires
CC the RNA polymerase sigma factor SigK. {ECO:0000269|PubMed:16385044}.
CC -!- SIMILARITY: Belongs to the UPF0714 family. {ECO:0000305}.
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DR EMBL; AL009126; CAB13666.1; -; Genomic_DNA.
DR PIR; C69890; C69890.
DR RefSeq; NP_389665.1; NC_000964.3.
DR RefSeq; WP_003245793.1; NZ_JNCM01000035.1.
DR PDB; 5ONJ; X-ray; 1.70 A; A=47-252.
DR PDB; 5ONK; X-ray; 1.03 A; A=47-252.
DR PDB; 5ONL; X-ray; 1.70 A; A=51-252.
DR PDB; 6HRI; X-ray; 1.03 A; A=51-252.
DR PDB; 6HRJ; X-ray; 1.70 A; A=47-252.
DR PDBsum; 5ONJ; -.
DR PDBsum; 5ONK; -.
DR PDBsum; 5ONL; -.
DR PDBsum; 6HRI; -.
DR PDBsum; 6HRJ; -.
DR AlphaFoldDB; O31815; -.
DR SMR; O31815; -.
DR STRING; 224308.BSU17820; -.
DR PaxDb; O31815; -.
DR PRIDE; O31815; -.
DR DNASU; 939553; -.
DR EnsemblBacteria; CAB13666; CAB13666; BSU_17820.
DR GeneID; 939553; -.
DR KEGG; bsu:BSU17820; -.
DR PATRIC; fig|224308.179.peg.1942; -.
DR eggNOG; COG4195; Bacteria.
DR OMA; KHVDCNI; -.
DR PhylomeDB; O31815; -.
DR BioCyc; BSUB:BSU17820-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016787; F:hydrolase activity; IDA:CACAO.
DR Gene3D; 3.40.630.100; -; 1.
DR InterPro; IPR008585; Gamma_PGA_hydro.
DR InterPro; IPR038128; Gamma_PGA_hydro_sf.
DR Pfam; PF05908; Gamma_PGA_hydro; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cell membrane; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..252
FT /note="UPF0714 protein YndL"
FT /id="PRO_0000360610"
FT TRANSMEM 33..51
FT /note="Helical"
FT /evidence="ECO:0000255"
FT HELIX 58..64
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 67..69
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 70..75
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 80..89
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 95..102
FT /evidence="ECO:0007829|PDB:5ONK"
FT TURN 103..105
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 106..113
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 119..122
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 126..128
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 132..139
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 142..150
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 157..162
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 164..176
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 181..183
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 198..200
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 202..204
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 206..213
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 214..218
FT /evidence="ECO:0007829|PDB:5ONK"
FT STRAND 221..223
FT /evidence="ECO:0007829|PDB:5ONK"
FT TURN 226..228
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 229..231
FT /evidence="ECO:0007829|PDB:5ONK"
FT HELIX 235..251
FT /evidence="ECO:0007829|PDB:5ONK"
SQ SEQUENCE 252 AA; 28218 MW; E5FFA32AB4FD7BE7 CRC64;
MKPAKVSLLR RLLHSLKHVD CNIAKRFPST IKIVKLLMIF MVFTPISSIY AEDVYQNFEE
LKNNEDPSDY GVVTKETGSP VLVLAIHGGG IEGGTSEVAR ELSKEYSMYL FEGLKSAGNS
VLHITSTHFD EPRALKMTGN HEYVISLHGY AEEDQQIEVG GTDRVRAADL VEKLQHAGFP
AVLLNMDHPH AGVSPNNIAN KSKTGLSIQI EMSTGFRKSL FGIFSLKSRA VTQNERFYEF
TEVMFRFLKN SY
