ID   YNC8_CAEEL              Reviewed;         311 AA.
AC   P34541;
DT   01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT   20-MAY-2008, sequence version 3.
DT   03-AUG-2022, entry version 122.
DE   RecName: Full=Putative RNA-binding protein R05D3.8;
GN   ORFNames=R05D3.8;
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   PubMed=7906398; DOI=10.1038/368032a0;
RA   Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA   Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA   Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA   Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA   Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA   Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA   Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA   Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA   Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA   Wilkinson-Sproat J., Wohldman P.;
RT   "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT   elegans.";
RL   Nature 368:32-38(1994).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG   The C. elegans sequencing consortium;
RT   "Genome sequence of the nematode C. elegans: a platform for investigating
RT   biology.";
RL   Science 282:2012-2018(1998).
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DR   EMBL; FO081667; CCD73196.1; -; Genomic_DNA.
DR   PIR; S44867; S44867.
DR   RefSeq; NP_498843.3; NM_066442.4.
DR   AlphaFoldDB; P34541; -.
DR   SMR; P34541; -.
DR   BioGRID; 52290; 1.
DR   IntAct; P34541; 1.
DR   STRING; 6239.R05D3.8; -.
DR   EPD; P34541; -.
DR   PaxDb; P34541; -.
DR   PeptideAtlas; P34541; -.
DR   PRIDE; P34541; -.
DR   EnsemblMetazoa; R05D3.8.1; R05D3.8.1; WBGene00019881.
DR   GeneID; 187602; -.
DR   KEGG; cel:CELE_R05D3.8; -.
DR   UCSC; R05D3.8; c. elegans.
DR   CTD; 187602; -.
DR   WormBase; R05D3.8; CE42017; WBGene00019881; -.
DR   eggNOG; ENOG502QXGP; Eukaryota.
DR   HOGENOM; CLU_050432_0_0_1; -.
DR   InParanoid; P34541; -.
DR   OMA; GYGPRKW; -.
DR   OrthoDB; 1707613at2759; -.
DR   PhylomeDB; P34541; -.
DR   Reactome; R-CEL-6803529; FGFR2 alternative splicing.
DR   Reactome; R-CEL-72163; mRNA Splicing - Major Pathway.
DR   PRO; PR:P34541; -.
DR   Proteomes; UP000001940; Chromosome III.
DR   Bgee; WBGene00019881; Expressed in germ line (C elegans) and 4 other tissues.
DR   GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR   GO; GO:0003730; F:mRNA 3'-UTR binding; IBA:GO_Central.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR   Gene3D; 3.30.70.330; -; 2.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00360; RRM; 2.
DR   SUPFAM; SSF54928; SSF54928; 2.
DR   PROSITE; PS50102; RRM; 1.
PE   4: Predicted;
KW   Reference proteome; RNA-binding.
FT   CHAIN           1..311
FT                   /note="Putative RNA-binding protein R05D3.8"
FT                   /id="PRO_0000065417"
FT   DOMAIN          155..235
FT                   /note="RRM"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT   REGION          261..311
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        261..281
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   311 AA;  35437 MW;  E925E7116963E9A9 CRC64;
     MVKRIFVQGL DSYTTESTVK KYFEQFGTLY ECILPPPPRY SVFDNGPDEE KISTRSSIRY
     EPVENDDVLD DELDVERYDV EKHGDFESYM KKIGEGEAFI KEPRKTSAGY AYITFVDSNG
     YSNCMKSDIH EIDRAKCTVE PAKDENDKKL KVESKRLFVS YFPLDRLTSK ELKMNFGAYG
     KITDVEFVSD SEGPLHFCII TFADSRSVDV LLTKSIYIRD VLMFTRRAVL KESVKIAEHK
     IKEQEQQNLV QLPPNHTAYL TPSRPVTSVH ASSSASSNHY DPSAAAGYAP LYHQPPESDP
     LSQCGYGPRK W