YCF2_CUCSA
ID YCF2_CUCSA Reviewed; 1988 AA.
AC Q2QD30; A5J1X8; Q4VZK7; Q4VZM5;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-A {ECO:0000255|HAMAP-Rule:MF_01330}; OrderedLocusNames=CsCp086;
GN and
GN Name=ycf2-B {ECO:0000255|HAMAP-Rule:MF_01330}; OrderedLocusNames=CsCp127;
OS Cucumis sativus (Cucumber).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Baekmibaekdadagi;
RX PubMed=16362300; DOI=10.1007/s00299-005-0097-y;
RA Kim J.-S., Jung J.D., Lee J.-A., Park H.-W., Oh K.-H., Jeong W.J.,
RA Choi D.-W., Liu J.R., Cho K.Y.;
RT "Complete sequence and organization of the cucumber (Cucumis sativus L. cv.
RT Baekmibaekdadagi) chloroplast genome.";
RL Plant Cell Rep. 25:334-340(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Borszczagowski;
RX PubMed=17607527; DOI=10.2478/s11658-007-0029-7;
RA Plader W.W., Yukawa Y., Sugiura M., Malepszy S.;
RT "The complete structure of the cucumber (Cucumis sativus L.) chloroplast
RT genome: its composition and comparative analysis.";
RL Cell. Mol. Biol. Lett. 12:584-594(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chipper, and cv. Gy14;
RX PubMed=17546086; DOI=10.1139/g07-003;
RA Chung S.-M., Gordon V.S., Staub J.E.;
RT "Sequencing cucumber (Cucumis sativus L.) chloroplast genomes identifies
RT differences between chilling-tolerant and -susceptible cucumber lines.";
RL Genome 50:215-225(2007).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- CAUTION: There are two genes for this protein in the chloroplast
CC inverted repeat; while are usually identical, in the sequence from
CC PubMed:17607527 they are not. {ECO:0000305}.
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DR EMBL; DQ119058; AAZ94693.1; -; Genomic_DNA.
DR EMBL; DQ119058; AAZ94710.1; -; Genomic_DNA.
DR EMBL; AJ970307; CAJ00802.1; -; Genomic_DNA.
DR EMBL; AJ970307; CAJ00820.1; -; Genomic_DNA.
DR EMBL; DQ865975; ABI97475.1; -; Genomic_DNA.
DR EMBL; DQ865975; ABI97478.1; -; Genomic_DNA.
DR EMBL; DQ865976; ABI98789.1; -; Genomic_DNA.
DR EMBL; DQ865976; ABI98807.1; -; Genomic_DNA.
DR RefSeq; YP_247643.1; NC_007144.1.
DR RefSeq; YP_247661.1; NC_007144.1.
DR AlphaFoldDB; Q2QD30; -.
DR STRING; 3659.XP_004174151.1; -.
DR GeneID; 3429358; -.
DR GeneID; 3429359; -.
DR KEGG; csv:3429358; -.
DR KEGG; csv:3429359; -.
DR eggNOG; ENOG502QRDV; Eukaryota.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 3.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 3.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid.
FT CHAIN 1..1988
FT /note="Protein Ycf2"
FT /id="PRO_0000242529"
FT REGION 1377..1396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1378..1396
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 1337..1344
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
FT CONFLICT 1845
FT /note="R -> S (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1866
FT /note="L -> RS (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1872..1881
FT /note="DHPFVSVFSH -> GSSFCLWCFHI (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1908
FT /note="R -> P (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1927
FT /note="R -> H (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1932
FT /note="R -> K (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1943
FT /note="N -> K (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
FT CONFLICT 1953
FT /note="E -> Q (in Ref. 2; CAJ00802)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 1988 AA; 233962 MW; 10CC447BC842F7EB CRC64;
MKGQQFKLWI LEFREIKNSH YFLDSWTQFN SLGSFIHIFF HQERFIKLLD SRIWSILLSR
NSQGSTSNRY FTIKGVVLFV VAVVLIYRIN NRKMVERKNL YLTGFLPIPM NFIGPRNDTL
EESFGSSNIN RLIVLLLYLP TSFVQVTDSS QLKGSSDQSR DHFDSISNED SEYHTLINQK
EIQQPLPEEI EEFLGNPTRS IRSFFSDRWS ELHMGSNPIE RSTRDQKLLK KEQDVSFVPS
RRSENKEIVN IFKIITYLQN TVSIHPISSD PGCDMVPKDE LDMDSSNKIS FLKKNPFIYL
FHLFHDRNRR GYTLHHDFES EERFQEMADL FTLSITEPDL VYHKGFAFSI DSYGLDQKQF
LNEVFNSRDE SKKKYLLVLP PIFYEENDSF YRRIRKKWVR TSPGNDLEDP KQKIVVFASN
NIMEAVNQYR LIRNLIQIQY YRYIRNVLNR FFLMNRSDRD LEYGIQRDQI GNDTLNHRTI
MKYTINQHLS NFKKGQKKWF DPLILISRTE RSMNRDPNAY RYKWSNGSKN FQEHFISEQK
SHFHFQVVFD RLRINQYSID WSEVIDKKDW SKSLRFFLSK LLVFLSKFLL FLSNSLPFFF
VSFGNIPIHR SEIHIYELKG PNDRLCNQLL ESIGLQIVHL KKLKPFLLDD HYTSQKSKFL
INGGTISPFL FNKIPKWMID SFDTRNNRRK SFDNTDSYFS MISHDQDNWL NPVKPFHRSS
LISSFYKATR LRFLNNPHHF CFYCNKRFPF YVDYVEKARI NNYDFTYGQF LNILFIRNKI
FSLCGGKKKH AFLERDTISP IESQVSNIFI PNDFPQSGDE RYNLYKSFHF PIRSNPFVRR
AIYSIADISV TPLTEGQIVN FERTYCQPLS DMNLSDSEGK NLHQYLNFNS NMGLIHTPCS
EKYLPSEKRK KQSLYRKKCL EKGQMYRTFQ RDSAFSTLSK WNLFQTYMPW FFTSTGYKYL
NLLFLDTFSD LLPILSSSPK FVSIFDDIMH RSDRSWRILR KKLCLPQWNL ISEISIKCLP
NLLLSEEMIH RNNESPSIST HLRSPNVREF LYSILFLLLI AVYLVRTHLL FVSRAYSELQ
TEFEKVKSLM IPSYMIELRK LLDRYPTYER NSFWLKNLFL VALEQLGDSL EEIWGSASGG
GPAYGVKSIR SKKKDWNINL INLISIIPNP INRIAFSRNT RHLSHTSKEI YSLIRKNVNG
DWIDDKIQSW VWNSDSIDDK EREFLVQFST LTTEKRIDQI LLSLTHSDHL SKNDSGYQMI
EQPGVIYLRY LVDIQKKYLM NYKFNTSCLA ERRTFLAHYQ TITHSQTSCG ANSFHFPSHG
KLFSLRLALS PGILVIGSIG TGRSYLVKYL ATNSYLPFIT VFLNKFRDNK PKFIDDSDDD
SDDIDDSGDI DDSDDIDRDL DIDTELELLT MMNALTMEMK LEIDQFYITL QFELIKAMSP
CIIWIPNIHD LYVNKSSHLY FGLLVNYLYR DFERCSTTNI LVIASTHIPQ KVDPALIAPN
KLNTCIKIRR LLIPQQRKHF FTLSYTRGFH LEKKMFHTNG FGSITMGSNV RDLVALTNEA
LSISITQRKS IIDTNIIRSA LHRQTWDLRS QVRSVQDHGI LFYQIGRALA QNVLLSNCSI
DPISIYMKKK SCNEGGSYLY NWYFELETSM KKLTILLYLL NCSAGSVVQD LWSLSGPDEK
NGITSYVLVE NDSHLVHGLL EVEGALFGSS WTEKDCSRFD NDRVTLLLRP EPRNPLDMIQ
NGSSSIVDQI FLYQKYESKF EEGEGVLDPQ QIEEDLFNHI VWAPRIWSPW GFLFDCIERP
NELGVPYWAR SFRGKRIIYD EEDELQENDS EFLQSGTVQY QTRDRSSKEQ GFFLINQFIW
DPADPLFFLF QDHPFVSVFS HREFFADEEM AKGLLTSQPA FPTSLEKRWF INIKNTQEKY
VELLIHRQRW LRTRTNSSLS KSNGFFRSNT LSESYQYLSN LFLSNGTLLD QMTKTLLRKR
WLFPDEMK
