YCF2_COFAR
ID YCF2_COFAR Reviewed; 2281 AA.
AC A0A379;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 14-NOV-2006, sequence version 1.
DT 03-AUG-2022, entry version 44.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-A {ECO:0000255|HAMAP-Rule:MF_01330};
GN and
GN Name=ycf2-B {ECO:0000255|HAMAP-Rule:MF_01330};
OS Coffea arabica (Arabian coffee).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=13443;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=17309688; DOI=10.1111/j.1467-7652.2007.00245.x;
RA Samson N., Bausher M.G., Lee S.-B., Jansen R.K., Daniell H.;
RT "The complete nucleotide sequence of the coffee (Coffea arabica L.)
RT chloroplast genome: organization and implications for biotechnology and
RT phylogenetic relationships amongst angiosperms.";
RL Plant Biotechnol. J. 5:339-353(2007).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
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DR EMBL; EF044213; ABJ89722.1; -; Genomic_DNA.
DR EMBL; EF044213; ABJ89741.1; -; Genomic_DNA.
DR RefSeq; YP_817526.1; NC_008535.1.
DR RefSeq; YP_817543.1; NC_008535.1.
DR AlphaFoldDB; A0A379; -.
DR GeneID; 4421767; -.
DR GeneID; 4421824; -.
DR Proteomes; UP000515148; Chloroplast Pltd.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid; Reference proteome.
FT CHAIN 1..2281
FT /note="Protein Ycf2"
FT /id="PRO_0000276549"
FT BINDING 1635..1642
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
SQ SEQUENCE 2281 AA; 266313 MW; 11D8625B12FE049D CRC64;
MKGHQFKSWI FELREILREI KNSHYFLDSW TQFNSVGSFI HIFFHQERFI KLFDPRIWSI
LLSRNSQGSI SNRYFTIKGV ILFVVVVLIY RINNRNMVES KNLYLIGLLP IPMNSIGPKN
DTLEESVGSS NINRLIVSLL SLPKGKKISE SCFLNPKEST WVLPITKKCS IPESNWGSRW
WRKWIGKGGD SSCKISNETA AGIEILFKEK DLKYLEFLFV YYMDDPTRKD RDWELFDRLS
LRKRRNTINL NSGPLFEILV KHWISYLMSA FREKIPIEAE GFFKQQGAGS TIQSNDIEHV
SHLFSRNKWA ISLQNCAQFH MWQFRQDLFI SWGKESDFLR NVSRENLIWL DNVWLVNKDR
FFSKVRNVSS NIQYDSTRSS FVQVTDSSQL KGSSDQSRDH LDSISNEDSE YHTLINQREI
QQLKERSILL DPSFLQTERT EIESDRFPKC LSGYSSMSRL FTEREKQMIN HLLPEEIEEF
LGNPTRSVRS FFSDRWSELH LGLNPTERST RDQKLLKKQQ DLSFVPSRRS ENKEMVNIFK
IITYLQNTVS IHPISSDPGC DMVPKDEPDM DSSNKISFLN KNPFFDLFHL FHARNRGGYT
LHHDFELEER FQEMADLFTL SITEPDLVYH KGFAFSIDSY GLDQKQFLNE VFNSRDESKK
KSLLVLPLIF YEENESFSRR IRKKWVRISC GNDLEDPQPK IVIFASNNIM GAVNQYRLIR
NLIQIQSSTY GYIRNVLNRF FLMNRSDRNF EYGIQIQRDQ IGKDTLNHRT IMKYTINQHL
SNLKKSQKKW LDPLILISRT ERSMNRDPDA YRYKGSNGSK NFQEHLEHFV SEQKSHFQVM
FDRLRINQYS IDWSEVIDKK DLSKPLRFFL SKSLLFLSKL LFFLSNSLPF FCVSFGNIPI
HRSEIYIYEF KGPDDQLCSQ LLESIGLQIV HLKKLKPFLL DDHDTSQKSK FLINGGTISP
FLFNKIPKWM VDSFHTRNNR RKSFDNTDSY FSMIFHDQDN WLNPVKPFHR SSLISSFYKA
NRLRFLNNPH HFCFYCNTRF PLSVEKARIN NYDFTYGQFL NILLRMNKIF SLCVGKKKHA
FGGRDTISPI ESQVSNIFIP NDFPQSGDET YNLYKSFHFL SRSDPFVRRA IYSIADISGT
PLTEGQIVNF ERTYCQPLSD MNLSDSEGKN LHQYRNFNSN MGLIHTPYSE KYLPSEKRKK
RILCLKKCVE KGQMYRTFQR DSAFSTLSKW NLFQTYMPWF LTSTGYKYLN LIFLDTFSDL
LPILSSSQKL VSIFHDIMHG SGISWRILQK NLCLPQWNLI SEISSKCLHN LLLSEERIHR
NKNNESPLIS THLRSPNVRE FLYSTLFLLL VAGYLVRTHL LFVSRVSSEL QTEFEKVKSL
IIPSSMIELR KLLDRYPTSE PNSFWLKNIF LAALEQLGDS LEEIRGSASG GNMLGPAYGV
KSIRSKKKYL NINLIDIVDL IPNPINRITF SRNTRHLSHT SKEIYSLIRK RKNVNGDWID
DKIESWVANS DSIGDEEREF LVQFSTLTTE KGIDQILLSL THSDHLSKND SGYQMIEQPG
AIYLRYLVDI HKKYLMNYEF NTFCLAERRI FLAHYQTITY SQTSCGANSF HFPSHGKPFS
LRLALSPSRA ILVIGSIGSG RSYLVKYLAT NSYVPFITVF LNKFLDNKPK GFLIDDINID
DSDDIDASDD IDRDLDTELE LLTMMNALTM DMMPEIDRFY ITLQFELAKA MSPCIIWIPN
IHDLDVNESN YLSLGLLVNH LSMDCERCST RNILVIASTH IPQKVDPALI APNKLNTCIK
IRRLLIPQQR KHLFTLSYTR GFHLEKKMFH TNGFGSITMG SNARDLVALT NEALSISITQ
KKSIIDTNTI RSALYRQTWY LRSQVRSVQD HGILFYQIGR AVAQNVFLSN CPIDPISIYM
KKKSCNEGDF YLYKWYFELG TSMKKLTILL YLLSCSAGSV AQDLWSLPGP DEKNGITSYG
LVENDSDLVH GLLEVEGALV GSSRTEKDCS QFDNDRVTLL LRPEPRNPLD MMQSGSCSIL
DQRFLYEKYE SEFEEGEGEG ALDPQQIEED LFNYIVWAPR IWRPWAFLFD CIERPNELGF
PYWSRPFWGK RIIYDEEDEL QENDSEFLQN GTVQYQTRDR SSKEQGPFRI SQFIWDPADP
LFFLFKDQPP GSVFSHRELF ADEEMSKGLL TSQTDPPTSI YKRWFIKNTQ EKHFELLINR
QRWLRTNSSL SNGSFRSNTL SESYQYLSNL FLSNGTLLDQ MTKTLLRKRW LFPDEMKIGF
M