Y5849_ARATH
ID Y5849_ARATH Reviewed; 364 AA.
AC Q9FFX2;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=B3 domain-containing protein At5g38490;
GN OrderedLocusNames=At5g38490; ORFNames=MBB18.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Xiao Y.-L., Underwood B.A., Moskal W.A. Jr., Redman J.C., Wang W.,
RA Monaghan E.L., Wu H.C., Utterback T., Town C.D.;
RT "Reconstruction of cDNA sequences for hypothetical genes in Arabidopsis
RT thaliana from 5' and 3' RACE products.";
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AB005231; BAB10139.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94325.1; -; Genomic_DNA.
DR EMBL; AY954871; AAX55197.1; -; Genomic_DNA.
DR EMBL; DQ132733; AAZ52763.1; -; mRNA.
DR EMBL; AB493769; BAH30607.1; -; Genomic_DNA.
DR RefSeq; NP_198665.1; NM_123210.2.
DR AlphaFoldDB; Q9FFX2; -.
DR BioGRID; 19088; 2.
DR IntAct; Q9FFX2; 2.
DR PaxDb; Q9FFX2; -.
DR PRIDE; Q9FFX2; -.
DR EnsemblPlants; AT5G38490.1; AT5G38490.1; AT5G38490.
DR GeneID; 833837; -.
DR Gramene; AT5G38490.1; AT5G38490.1; AT5G38490.
DR KEGG; ath:AT5G38490; -.
DR Araport; AT5G38490; -.
DR TAIR; locus:2159898; AT5G38490.
DR HOGENOM; CLU_072178_0_0_1; -.
DR InParanoid; Q9FFX2; -.
DR OMA; VMRYMNA; -.
DR OrthoDB; 741298at2759; -.
DR PhylomeDB; Q9FFX2; -.
DR PRO; PR:Q9FFX2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FFX2; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..364
FT /note="B3 domain-containing protein At5g38490"
FT /id="PRO_0000375164"
FT DNA_BIND 260..364
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 148..202
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..188
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 364 AA; 41728 MW; 97A00DAE87739FE1 CRC64;
MSSIMYHDNH LTDSGKNMSS GLSLLAYVTV MVAEEEEQRS RLLAEKREES KCKMSFFYLF
PRKIKSSLAK RRYTQQNPNG ASTCSSSLPD LNLIPTDFET DNLQNPCFDE PMVCDEEQRL
KKGKSKIVYD EDYDDESEKK LFDNLNGAST SSSSLLNLPC LEPSTETKDV PNPNYQSSSP
SSCLTGKTNR KRRAVEQRKS GKVKKVKVSP LPRLCTEMPE WIFQVMRYMN ADAETPRLIF
ERTLFKSDVN SNLSRLLMPF QKLIRNDFLT PAECRAMQKD EDNDEEDDEN IGVGTVLVNQ
RFQKWGLRFK IWAMEKDSGH GTLNYTLNWG WNDVVKSSSL KVGDKISLWT FRCRGVLCFA
LDTE