XPO2_DANRE
ID XPO2_DANRE Reviewed; 971 AA.
AC Q7SZC2; G1K2H9;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2017, sequence version 2.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Exportin-2;
DE Short=Exp2;
DE AltName: Full=Chromosome segregation 1-like protein;
DE AltName: Full=Importin-alpha re-exporter;
GN Name=cse1l; Synonyms=xpo2;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1] {ECO:0000312|Ensembl:ENSDARP00000022858, ECO:0000312|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000312|Ensembl:ENSDARP00000022858,
RC ECO:0000312|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB; TISSUE=Kidney;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP FUNCTION, INTERACTION WITH CFTR, SUBCELLULAR LOCATION, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=20933420; DOI=10.1016/j.cub.2010.09.012;
RA Bagnat M., Navis A., Herbstreith S., Brand-Arzamendi K., Curado S.,
RA Gabriel S., Mostov K., Huisken J., Stainier D.Y.;
RT "Cse1l is a negative regulator of CFTR-dependent fluid secretion.";
RL Curr. Biol. 20:1840-1845(2010).
CC -!- FUNCTION: Export receptor for importin alpha. Mediates importin-alpha
CC re-export from the nucleus to the cytoplasm after import substrates
CC have been released into the nucleoplasm (By similarity). Negatively
CC regulates fluid secretion and plays a role in fluid homeostasis by
CC down-regulating cftr activity (PubMed:20933420).
CC {ECO:0000250|UniProtKB:P55060, ECO:0000269|PubMed:20933420}.
CC -!- SUBUNIT: Interacts with cftr (PubMed:20933420).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305|PubMed:20933420}. Nucleus
CC {ECO:0000250|UniProtKB:P55060}. Apical cell membrane
CC {ECO:0000269|PubMed:20933420}; Peripheral membrane protein
CC {ECO:0000305|PubMed:20933420}. Basal cell membrane
CC {ECO:0000269|PubMed:20933420}; Peripheral membrane protein
CC {ECO:0000305|PubMed:20933420}. Lateral cell membrane
CC {ECO:0000269|PubMed:20933420}; Peripheral membrane protein
CC {ECO:0000305|PubMed:20933420}. Note=Shuttles between the nucleus and
CC the cytoplasm. {ECO:0000250|UniProtKB:P55060}.
CC -!- TISSUE SPECIFICITY: Detected in larval gut, liver, exocrine pancreas
CC and part of the brain and retina at 96 hpf.
CC {ECO:0000269|PubMed:20933420}.
CC -!- DISRUPTION PHENOTYPE: Morpholino knockdown of the protein causes strong
CC expansion of the gut lumen, due to excessive fluid accumulation.
CC {ECO:0000269|PubMed:20933420}.
CC -!- SIMILARITY: Belongs to the XPO2/CSE1 family. {ECO:0000305}.
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DR EMBL; CR559931; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC052479; AAH52479.1; -; mRNA.
DR EMBL; BC066737; AAH66737.1; -; mRNA.
DR RefSeq; NP_958858.1; NM_201450.1.
DR AlphaFoldDB; Q7SZC2; -.
DR SMR; Q7SZC2; -.
DR BioGRID; 78862; 1.
DR STRING; 7955.ENSDARP00000022858; -.
DR PaxDb; Q7SZC2; -.
DR PRIDE; Q7SZC2; -.
DR Ensembl; ENSDART00000013203; ENSDARP00000022858; ENSDARG00000006963.
DR GeneID; 30707; -.
DR KEGG; dre:30707; -.
DR CTD; 1434; -.
DR ZFIN; ZDB-GENE-990603-1; cse1l.
DR eggNOG; KOG1992; Eukaryota.
DR GeneTree; ENSGT00550000074884; -.
DR InParanoid; Q7SZC2; -.
DR OMA; YRYEFKS; -.
DR OrthoDB; 1248958at2759; -.
DR PhylomeDB; Q7SZC2; -.
DR TreeFam; TF300473; -.
DR PRO; PR:Q7SZC2; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 11.
DR Bgee; ENSDARG00000006963; Expressed in mature ovarian follicle and 32 other tissues.
DR GO; GO:0016324; C:apical plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009925; C:basal plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0016328; C:lateral plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005635; C:nuclear envelope; IBA:GO_Central.
DR GO; GO:0005049; F:nuclear export signal receptor activity; IBA:GO_Central.
DR GO; GO:0031267; F:small GTPase binding; IEA:InterPro.
DR GO; GO:0007589; P:body fluid secretion; IMP:ZFIN.
DR GO; GO:0006611; P:protein export from nucleus; IBA:GO_Central.
DR GO; GO:0006606; P:protein import into nucleus; IBA:GO_Central.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR001494; Importin-beta_N.
DR InterPro; IPR005043; XPO2_C.
DR InterPro; IPR013713; XPO2_central.
DR Pfam; PF03378; CAS_CSE1; 1.
DR Pfam; PF08506; Cse1; 1.
DR Pfam; PF03810; IBN_N; 1.
DR SMART; SM00913; IBN_N; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS50166; IMPORTIN_B_NT; 1.
PE 1: Evidence at protein level;
KW Cell membrane; Cytoplasm; Membrane; Nucleus; Protein transport;
KW Reference proteome; Transport.
FT CHAIN 1..971
FT /note="Exportin-2"
FT /id="PRO_0000237680"
FT DOMAIN 29..102
FT /note="Importin N-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00115"
FT CONFLICT 48
FT /note="A -> T (in Ref. 2; AAH52479/AAH66737)"
SQ SEQUENCE 971 AA; 110028 MW; 632AFF088108925D CRC64;
MELNDGNLQT LTEYLQKTLS ADPAVRRPAE KFLESVEGNQ NYPILLLAVL EKSQNEVIRV
CSAVTFKNYI KRNWRIVEDE PNKISDPDRT AIKANIVNLM LTSPEQIQKQ LSDAISIIGR
EDFPLKWPDL LTEMVNRFQS GDFHIINGVL RTAHSLFKRY RHEFKSNELW SEIKLVLDTF
AQPLTELFKA TIELCQTHAT DINALKVLFS SLTLISKLFY SLNFQDLPEF FEDNMETWMT
NFHNLLTLDN KLLQTDDEEE AGLLELLKSQ ICDNAALYAQ KYDEEFQPYL PRFVTAIWNL
LVTTGQEVKY DLLVSNAIQF LASVCERPHY KHLFEDQNVL TSICEKVIVP NMEFRSADEE
AFEDNSEEYI IRDLEGSDID TRRRAACDLV RGLCKFFEGP VTGIFSGYVN SMLAEYAKNP
GVNWKHKDAA IYLVTSLASK AQTQKHGITQ ANELVNLSEF FLNHILIDLK SPNVNEFPVL
KSDAIKYVMT FRSQLPKEQL LQAVPLLVSH LQAESIVQHT YAAHALERLF TMRGGNNTTL
ITPTEMAPFT EQLLNHLFKA LAIPGSSENE YIMKAIMRSF SLLQEAIVPY IPTLIGQLTH
KLLLVSKNPS KPHFNHYLFE SLCLSIRITC KANPDTVSSF EEALFPVFTE ILQNDVQEFV
PYVFQVMSLL LEIHSNSIPS SYMALFPHLL QPVLWERTGN IPPLVRLLQA YLEKGAAAIA
NTASDKIPGL LGVFQKLIAS KANDHQGFYL LNSIVEHMPA EAITQYRKQI FILLFQRLQS
SKTTKFVKSF LVFINLYSVK YGAIALQEIF DDIQPKMFGM VVEKIVIPEV QKVSGQVEKK
ICAVGIIKIL TECPAMMDTE YTKLWAPLLQ ALIGLFELPE DDSIPDDEHF IDIEDTPGYQ
TAFSQLAFAG KKEHDPIGDA VSNPKILLAQ SLHKLSTACP GRVPSMLSTS LPTEALQFLQ
GYLQAATVQL V