WDR12_CULQU
ID WDR12_CULQU Reviewed; 425 AA.
AC B0W517;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 14-APR-2009, sequence version 2.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=Ribosome biogenesis protein WDR12 homolog {ECO:0000255|HAMAP-Rule:MF_03029};
GN ORFNames=CPIJ001500;
OS Culex quinquefasciatus (Southern house mosquito) (Culex pungens).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae;
OC Culicinae; Culicini; Culex; Culex.
OX NCBI_TaxID=7176;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JHB;
RG The Broad Institute Genome Sequencing Platform;
RA Atkinson P.W., Hemingway J., Christensen B.M., Higgs S., Kodira C.D.,
RA Hannick L.I., Megy K., O'Leary S.B., Pearson M., Haas B.J., Mauceli E.,
RA Wortman J.R., Lee N.H., Guigo R., Stanke M., Alvarado L., Amedeo P.,
RA Antoine C.H., Arensburger P., Bidwell S.L., Crawford M., Camaro F.,
RA Devon K., Engels R., Hammond M., Howarth C., Koehrsen M., Lawson D.,
RA Montgomery P., Nene V., Nusbaum C., Puiu D., Romero-Severson J.,
RA Severson D.W., Shumway M., Sisk P., Stolte C., Zeng Q., Eisenstadt E.,
RA Fraser-Liggett C.M., Strausberg R., Galagan J., Birren B., Collins F.H.;
RT "Annotation of Culex pipiens quinquefasciatus.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000255|HAMAP-Rule:MF_03029}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03029}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03029}.
CC -!- SIMILARITY: Belongs to the WD repeat WDR12/YTM1 family.
CC {ECO:0000255|HAMAP-Rule:MF_03029}.
CC -!- SEQUENCE CAUTION:
CC Sequence=EDS34583.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EDS34583.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; DS231840; EDS34583.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_001843801.1; XM_001843749.1.
DR AlphaFoldDB; B0W517; -.
DR SMR; B0W517; -.
DR STRING; 7176.CPIJ001500-PA; -.
DR GeneID; 6033337; -.
DR KEGG; cqu:CpipJ_CPIJ001500; -.
DR VEuPathDB; VectorBase:CPIJ001500; -.
DR VEuPathDB; VectorBase:CQUJHB008532; -.
DR eggNOG; KOG0313; Eukaryota.
DR HOGENOM; CLU_000288_57_0_1; -.
DR InParanoid; B0W517; -.
DR OrthoDB; 1540178at2759; -.
DR Proteomes; UP000002320; Partially assembled WGS sequence.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0070545; C:PeBoW complex; ISS:UniProtKB.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR Gene3D; 2.130.10.10; -; 1.
DR HAMAP; MF_03029; WDR12; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR012972; NLE.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR028599; WDR12/Ytm1.
DR Pfam; PF08154; NLE; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing;
KW WD repeat.
FT CHAIN 1..425
FT /note="Ribosome biogenesis protein WDR12 homolog"
FT /id="PRO_0000369554"
FT REPEAT 106..143
FT /note="WD 1"
FT REPEAT 145..187
FT /note="WD 2"
FT REPEAT 194..233
FT /note="WD 3"
FT REPEAT 258..296
FT /note="WD 4"
FT REPEAT 298..337
FT /note="WD 5"
FT REPEAT 343..383
FT /note="WD 6"
FT REPEAT 387..425
FT /note="WD 7"
FT REGION 13..94
FT /note="Ubiquitin-like (UBL) domain"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03029"
FT REGION 227..247
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..247
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 425 AA; 47350 MW; 446B5B842824A5C7 CRC64;
MALKITGKAE GQLQLHLITK QKQFAVPDVP YSIRANVSTK ELNVLVNTLL KDAGNAEAGK
VEFDFLLNGE FPLGQHLKER DVSFEDTVEL EYVERYPAPE PQDCLLHDDW VSAVEARDNW
ILTGCYDNTL NLWTTKGKHK LTIPGHIAPV KGVTWISLDE EKGVFASASQ DQTVMLWEWN
VAANSVECVQ VCKGHERGVD CIAANGSKTK MATGSWDTML KIWSTDVRSG GGDSEPSTSK
RQKLDQGSAR TPLMTLAGHR ECISGVQWID DNTLVTSSWD HTIKIWDLAL NGIKSEISGN
KSFFDLSYSK LNGLIITASP DKNLRLYDPK SNQGTLVKNT YLGHTQWVQS VRWSTTNEYL
FVSGAYDNHV KLWDYRSPKA PIFELIGHED KVLACDWSNP RFILSGGSDN SVRVFKSKIA
IGGEK