TTR16_CAEEL
ID TTR16_CAEEL Reviewed; 132 AA.
AC P55955; Q9XWL2;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 20-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Transthyretin-like protein 16;
DE AltName: Full=Unknown spot 4 protein from 2D-page;
DE Flags: Precursor;
GN Name=ttr-16; ORFNames=Y5F2A.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP PROTEIN SEQUENCE OF 20-42.
RC STRAIN=Bristol N2;
RX PubMed=9150941; DOI=10.1002/elps.1150180337;
RA Bini L., Heid H., Liberatori S., Geier G., Pallini V., Zwilling R.;
RT "Two-dimensional gel electrophoresis of Caenorhabditis elegans homogenates
RT and identification of protein spots by microsequencing.";
RL Electrophoresis 18:557-562(1997).
RN [3]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-23, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=12754521; DOI=10.1038/nbt829;
RA Kaji H., Saito H., Yamauchi Y., Shinkawa T., Taoka M., Hirabayashi J.,
RA Kasai K., Takahashi N., Isobe T.;
RT "Lectin affinity capture, isotope-coded tagging and mass spectrometry to
RT identify N-linked glycoproteins.";
RL Nat. Biotechnol. 21:667-672(2003).
RN [4]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-23, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RX PubMed=15888633; DOI=10.1093/glycob/cwi075;
RA Fan X., She Y.-M., Bagshaw R.D., Callahan J.W., Schachter H., Mahuran D.J.;
RT "Identification of the hydrophobic glycoproteins of Caenorhabditis
RT elegans.";
RL Glycobiology 15:952-964(2005).
RN [5]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-23, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=17761667; DOI=10.1074/mcp.m600392-mcp200;
RA Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T.,
RA Taoka M., Takahashi N., Isobe T.;
RT "Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis
RT elegans and suggests an atypical translocation mechanism for integral
RT membrane proteins.";
RL Mol. Cell. Proteomics 6:2100-2109(2007).
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the nematode transthyretin-like family.
CC {ECO:0000305}.
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DR EMBL; AL032641; CAA21645.1; -; Genomic_DNA.
DR PIR; T27247; T27247.
DR RefSeq; NP_502060.1; NM_069659.5.
DR AlphaFoldDB; P55955; -.
DR SMR; P55955; -.
DR BioGRID; 43102; 14.
DR STRING; 6239.Y5F2A.1; -.
DR iPTMnet; P55955; -.
DR EPD; P55955; -.
DR PaxDb; P55955; -.
DR PeptideAtlas; P55955; -.
DR EnsemblMetazoa; Y5F2A.1.1; Y5F2A.1.1; WBGene00012382.
DR GeneID; 178002; -.
DR CTD; 178002; -.
DR WormBase; Y5F2A.1; CE19022; WBGene00012382; ttr-16.
DR eggNOG; ENOG502R6UF; Eukaryota.
DR HOGENOM; CLU_121109_0_0_1; -.
DR InParanoid; P55955; -.
DR OMA; THNCNPS; -.
DR OrthoDB; 1566606at2759; -.
DR PhylomeDB; P55955; -.
DR PRO; PR:P55955; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00012382; Expressed in larva and 4 other tissues.
DR GO; GO:0009986; C:cell surface; IEA:InterPro.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.3330; -; 1.
DR InterPro; IPR001534; Transthyretin-like.
DR InterPro; IPR038479; Transthyretin-like_sf.
DR PANTHER; PTHR21700; PTHR21700; 1.
DR Pfam; PF01060; TTR-52; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Glycoprotein; Reference proteome; Secreted;
KW Signal.
FT SIGNAL 1..19
FT /evidence="ECO:0000269|PubMed:9150941"
FT CHAIN 20..132
FT /note="Transthyretin-like protein 16"
FT /id="PRO_0000036249"
FT CARBOHYD 23
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000269|PubMed:12754521,
FT ECO:0000269|PubMed:15888633, ECO:0000269|PubMed:17761667"
SQ SEQUENCE 132 AA; 14693 MW; FBC0A2698FA25A11 CRC64;
MRSLVVCLLL AACALECTAR LQNVTVKGVA VCNKKRLANV EVQLYEKDTL DPDDLLDTKK
TDAEGEFSVY GEEDETHAIA PYLLITHSCN PSKPNCVRIG RYLVPEDKIG GTYDMTYVTL
DIKVHGEKEK CQ