ID   C1D_CHICK               Reviewed;         142 AA.
AC   Q5ZHS3;
DT   05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   23-NOV-2004, sequence version 1.
DT   03-AUG-2022, entry version 73.
DE   RecName: Full=Nuclear nucleic acid-binding protein C1D;
GN   Name=C1D; ORFNames=RCJMB04_33m12;
OS   Gallus gallus (Chicken).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC   Phasianinae; Gallus.
OX   NCBI_TaxID=9031;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=CB; TISSUE=Bursa of Fabricius;
RX   PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.-M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis.";
RL   Genome Biol. 6:R6.1-R6.9(2005).
CC   -!- FUNCTION: Plays a role in the recruitment of the exosome to pre-rRNA to
CC       mediate the 3'-5' end processing of the 5.8S rRNA. {ECO:0000250}.
CC   -!- SUBUNIT: Monomer and homodimer. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q13901}. Cytoplasm
CC       {ECO:0000250|UniProtKB:Q13901}. Nucleus, nucleolus
CC       {ECO:0000250|UniProtKB:Q13901}.
CC   -!- SIMILARITY: Belongs to the C1D family. {ECO:0000305}.
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DR   EMBL; AJ721061; CAG32720.1; -; mRNA.
DR   RefSeq; NP_001026207.2; NM_001031036.2.
DR   RefSeq; NP_001231666.1; NM_001244737.1.
DR   AlphaFoldDB; Q5ZHS3; -.
DR   SMR; Q5ZHS3; -.
DR   STRING; 9031.ENSGALP00000042966; -.
DR   PaxDb; Q5ZHS3; -.
DR   GeneID; 421267; -.
DR   KEGG; gga:421267; -.
DR   CTD; 10438; -.
DR   VEuPathDB; HostDB:geneid_421267; -.
DR   eggNOG; KOG4835; Eukaryota.
DR   InParanoid; Q5ZHS3; -.
DR   OrthoDB; 1436833at2759; -.
DR   PhylomeDB; Q5ZHS3; -.
DR   PRO; PR:Q5ZHS3; -.
DR   Proteomes; UP000000539; Unplaced.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0000178; C:exosome (RNase complex); IBA:GO_Central.
DR   GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0000460; P:maturation of 5.8S rRNA; IBA:GO_Central.
DR   GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR   InterPro; IPR011082; Exosome-assoc_fac/DNA_repair.
DR   InterPro; IPR007146; Sas10/Utp3/C1D.
DR   PANTHER; PTHR15341; PTHR15341; 1.
DR   Pfam; PF04000; Sas10_Utp3; 1.
PE   2: Evidence at transcript level;
KW   Cytoplasm; DNA-binding; Nucleus; Reference proteome; RNA-binding;
KW   rRNA processing.
FT   CHAIN           1..142
FT                   /note="Nuclear nucleic acid-binding protein C1D"
FT                   /id="PRO_0000316303"
FT   REGION          1..100
FT                   /note="Required for transcriptional repression"
FT                   /evidence="ECO:0000250"
FT   REGION          120..142
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   142 AA;  16379 MW;  24374AF165F3CE55 CRC64;
     MAEDINAEEY PTEIHDYLTT FEKSLTSVDE MLKTMMSVSR SELLQKLEPL EQAKLDLVSA
     YTLNSMFWVY LATQGINPKE HPVKQELERI RTYMNKVKEI ADKKKASKLD KGAASRFVRN
     ALWEPNPENG QTPAKAKKRK MN