TNPA_ECOLI
ID TNPA_ECOLI Reviewed; 1002 AA.
AC Q00037;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 25-MAY-2022, entry version 87.
DE RecName: Full=Transposase for transposon gamma-delta;
DE AltName: Full=Transposon Tn1000 transposase;
GN Name=tnpA; OrderedLocusNames=ECOK12F010;
OS Escherichia coli (strain K12).
OG Plasmid F.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=7612932; DOI=10.3109/10425179509029361;
RA Broom J.E., Hill D.F., Hughes G., Jones W.A., McNaughton J.C.,
RA Stockwell P.A., Petersen G.B.;
RT "Sequence of a transposon identified as Tn1000 (gamma delta).";
RL DNA Seq. 5:185-189(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8080658; DOI=10.1266/jjg.69.269;
RA Maekawa T., Ohtsubo E.;
RT "Identification of the region that determines the specificity of binding of
RT the transposases encoded by Tn3 and gamma delta to the terminal inverted
RT repeat sequences.";
RL Jpn. J. Genet. 69:269-285(1994).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / CR63; PLASMID=F;
RA Shimizu H., Saitoh Y., Suda Y., Uehara K., Sampei G., Mizobuchi K.;
RT "Complete nucleotide sequence of the F plasmid: its implications for
RT organization and diversification of plasmid genomes.";
RL Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 811-1002.
RC STRAIN=K12 / HFRC;
RX PubMed=1709493; DOI=10.1093/nar/19.8.1845;
RA Albrechtsen B., Ross B.M., Squires C., Squires C.L.;
RT "Transcriptional termination sequence at the end of the Escherichia coli
RT ribosomal RNA G operon: complex terminators and antitermination.";
RL Nucleic Acids Res. 19:1845-1852(1991).
CC -!- FUNCTION: Required for transposition of transposon Tn1000.
CC -!- SIMILARITY: Belongs to the transposase 7 family. {ECO:0000305}.
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DR EMBL; X60200; CAA42760.1; -; Genomic_DNA.
DR EMBL; D16449; BAA03914.1; -; Genomic_DNA.
DR EMBL; X56780; CAA40100.1; -; Genomic_DNA.
DR EMBL; AP001918; BAA97880.1; -; Genomic_DNA.
DR PIR; I56963; I56963.
DR RefSeq; NP_061389.1; NC_002483.1.
DR RefSeq; WP_001143750.1; NZ_CP047127.1.
DR AlphaFoldDB; Q00037; -.
DR PRIDE; Q00037; -.
DR PATRIC; fig|83333.107.peg.593; -.
DR PRO; PR:Q00037; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0006313; P:transposition, DNA-mediated; IEA:InterPro.
DR InterPro; IPR025296; DUF4158.
DR InterPro; IPR002513; Tn3_Tnp_DDE_dom.
DR Pfam; PF01526; DDE_Tnp_Tn3; 1.
DR Pfam; PF13700; DUF4158; 1.
PE 3: Inferred from homology;
KW DNA recombination; DNA-binding; Plasmid; Transposable element;
KW Transposition.
FT CHAIN 1..1002
FT /note="Transposase for transposon gamma-delta"
FT /id="PRO_0000075426"
SQ SEQUENCE 1002 AA; 113788 MW; 3278F27D2BEA15AC CRC64;
MPVDFLTSDQ KQNYGCYAAE PNDVQLARYF HLDERDLAFI NQRRGKHNRL GIALQLTTAR
FLGTFLTDLT QVLPGVQHFV AVQLNIHRPE VLSRYAERDT TLREHTALIK EYYGYHEFGD
FPWSFRLKRL LYTRAWLSNE RPGLMFDFAT AWLLQNKVLL PGATTLVRLI SEIRERANQR
LWKKLAALPN KWQAAQVMEL LVIPEGQRVS ALEQLKKGPV TVSGPAFNEA LERYIRLRSL
EFSRLNFSGL PAIQLRNLAR YAGMASVKYI ARMPQQRKLA VLTAFVKAQE ITALDDAVDV
LDMLILDIIR EAKKTGQKKR LRTLKDLDQA ALLLARACAL LLDDNTDVPD LRQVIFKCVP
KNRLAESVSK VNELARPQNN NFHDEMVEQY GRVKRFLPAV LRDLHFRAAP AGEHVLAAIH
YLAELNGSKK RILDDAPEHI ITGPWKRLVY DAEGRIQRAG YSLCLLERLQ DALRRRDIWL
ENSDRWGDPR EKLLQGEEWQ TQRIPVCRAL GHPVDGRKGV QQLAIQLDET WKAVASRFEK
NAEVHICNEG KYPSLTISCL EKQEEPPSLL RLNNRIKQLL PPVDLTELLL EIDAQTGFTH
EFAHVSESGA RAQDLHISLC AVLMAEACNI GLEPLIKHNI PALTRHRLSW VKQNYLRAET
LVSANARLVD FQSTLELAGR WGGGEVASAD GMRFVTPVKT INSGSNRKYF GSGRGITWYN
FVSDQYSGFH GIVVPGTLRD SIFVLEGLLE QQTGLNPVEI MTDTAGSSDI IFGLFWLLGY
QFSPRLADAG EAVFWRVNKS ANYGVLDKLA RGYADLSKAE SQWDEMMRTA GSLKLGTIHA
SELIRSLLKS SRPSGLAQAI MEVGRVNKTL YLLNYIDDED YRRRILTQLN RGEGRHAVAR
AICYGQRGEI RKRYREGQED QLGALGLVTN AVVLWNTLYM EEALSWMRRN GEEIIDEDIA
RLSPLMHGHI NMLGHYTFTL PEDILKGELR ALNLNINNEL SP