TGDS_DICDI
ID TGDS_DICDI Reviewed; 434 AA.
AC Q54WS6;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=dTDP-D-glucose 4,6-dehydratase;
DE EC=4.2.1.46;
GN Name=tgds; ORFNames=DDB_G0279465;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose
CC + H2O; Xref=Rhea:RHEA:17221, ChEBI:CHEBI:15377, ChEBI:CHEBI:57477,
CC ChEBI:CHEBI:57649; EC=4.2.1.46;
CC -!- COFACTOR:
CC Name=NAD(+); Xref=ChEBI:CHEBI:57540; Evidence={ECO:0000250};
CC -!- SIMILARITY: Belongs to the NAD(P)-dependent epimerase/dehydratase
CC family. dTDP-glucose dehydratase subfamily. {ECO:0000305}.
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DR EMBL; AAFI02000031; EAL67671.1; -; Genomic_DNA.
DR RefSeq; XP_641641.1; XM_636549.1.
DR AlphaFoldDB; Q54WS6; -.
DR SMR; Q54WS6; -.
DR STRING; 44689.DDB0231748; -.
DR PaxDb; Q54WS6; -.
DR EnsemblProtists; EAL67671; EAL67671; DDB_G0279465.
DR GeneID; 8622047; -.
DR KEGG; ddi:DDB_G0279465; -.
DR dictyBase; DDB_G0279465; tgds.
DR eggNOG; KOG0747; Eukaryota.
DR HOGENOM; CLU_007383_1_14_1; -.
DR InParanoid; Q54WS6; -.
DR OMA; KLIPLMC; -.
DR PhylomeDB; Q54WS6; -.
DR PRO; PR:Q54WS6; -.
DR Proteomes; UP000002195; Chromosome 3.
DR GO; GO:0008460; F:dTDP-glucose 4,6-dehydratase activity; IBA:GO_Central.
DR GO; GO:0009225; P:nucleotide-sugar metabolic process; IEA:InterPro.
DR CDD; cd05246; dTDP_GD_SDR_e; 1.
DR InterPro; IPR005888; dTDP_Gluc_deHydtase.
DR InterPro; IPR016040; NAD(P)-bd_dom.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF16363; GDP_Man_Dehyd; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 3: Inferred from homology;
KW Lyase; NAD; Reference proteome.
FT CHAIN 1..434
FT /note="dTDP-D-glucose 4,6-dehydratase"
FT /id="PRO_0000328214"
FT REGION 286..310
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 135
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT ACT_SITE 136
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT ACT_SITE 169
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT BINDING 134
FT /ligand="substrate"
FT /evidence="ECO:0000250"
SQ SEQUENCE 434 AA; 50332 MW; 81F4935E8CD8781A CRC64;
MNNKDDLFIQ KILITGGAGF IGSHLAIYLT KKFKNSKIIV LDKLDYCSNI NNLGCVLKEL
NFKFYKGNIL DSELLENIFE KEKIDIVIHL AAYTHVDNSF KQSIKFTENN ILGTHYLLET
CKNYKLKKFI YVSTDEVYGS GLIEDNDDNN NSINQSSNEK SILNPTNPYS ASKAGAEHLV
QSYYKSFKLP VIITRANNIY GPKQYPEKII PKFINLLLNN KKCTIHGTGK NTRNYLYIDD
IVSAFDIILR KGEIGNVYNI GTDFEISNLD VAKKIINISI NLNNNNNNNN NNNNNNNNNN
NNNNNNNNND FNIMDYKKFI NYIDDRPFND HRYNINYSKL SNLGWKKSIS WEEGIEKTFI
WYKNNRNYWL NLNVDSYENI NNDNNFKYFG NQNNNNENNN NDNNENNNNC RVCSNIDLNY
GEKKPFHLTL KSEE