TCX8_ARATH
ID TCX8_ARATH Reviewed; 368 AA.
AC Q700D0; A0MEW6; Q9LW71;
DT 11-JUL-2012, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 109.
DE RecName: Full=Protein tesmin/TSO1-like CXC 8;
DE Short=AtTCX8;
GN Name=TCX8; OrderedLocusNames=At3g16160; ORFNames=MSL1.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15208423; DOI=10.1104/pp.104.042176;
RA Gong W., Shen Y.-P., Ma L.-G., Pan Y., Du Y.-L., Wang D.-H., Yang J.-Y.,
RA Hu L.-D., Liu X.-F., Dong C.-X., Ma L., Chen Y.-H., Yang X.-Y., Gao Y.,
RA Zhu D., Tan X., Mu J.-Y., Zhang D.-B., Liu Y.-L., Dinesh-Kumar S.P., Li Y.,
RA Wang X.-P., Gu H.-Y., Qu L.-J., Bai S.-N., Lu Y.-T., Li J.-Y., Zhao J.-D.,
RA Zuo J., Huang H., Deng X.-W., Zhu Y.-X.;
RT "Genome-wide ORFeome cloning and analysis of Arabidopsis transcription
RT factor genes.";
RL Plant Physiol. 135:773-782(2004).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [5]
RP GENE FAMILY, NOMENCLATURE, AND ZINC-BINDING.
RX PubMed=18057042; DOI=10.1093/jxb/erm215;
RA Andersen S.U., Algreen-Petersen R.G., Hoedl M., Jurkiewicz A.,
RA Cvitanich C., Braunschweig U., Schauser L., Oh S.A., Twell D., Jensen E.O.;
RT "The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds
RT zinc in vitro and TSO1 is required for both male and female fertility in
RT Arabidopsis thaliana.";
RL J. Exp. Bot. 58:3657-3670(2007).
CC -!- FUNCTION: Plays a role in development of both male and female
CC reproductive tissues. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- DOMAIN: The cysteine-rich domain CRC binds zinc in vitro.
CC -!- SIMILARITY: Belongs to the lin-54 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABK28561.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
CC Sequence=BAB02682.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB012247; BAB02682.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE75778.1; -; Genomic_DNA.
DR EMBL; AJ630495; CAG25868.1; -; mRNA.
DR EMBL; AY568667; AAS79557.1; -; mRNA.
DR EMBL; DQ653089; ABK28561.1; ALT_SEQ; mRNA.
DR RefSeq; NP_188237.2; NM_112486.3.
DR AlphaFoldDB; Q700D0; -.
DR SMR; Q700D0; -.
DR BioGRID; 6195; 51.
DR IntAct; Q700D0; 50.
DR STRING; 3702.AT3G16160.1; -.
DR PaxDb; Q700D0; -.
DR PRIDE; Q700D0; -.
DR EnsemblPlants; AT3G16160.1; AT3G16160.1; AT3G16160.
DR GeneID; 820861; -.
DR Gramene; AT3G16160.1; AT3G16160.1; AT3G16160.
DR KEGG; ath:AT3G16160; -.
DR Araport; AT3G16160; -.
DR TAIR; locus:2093417; AT3G16160.
DR eggNOG; KOG1171; Eukaryota.
DR HOGENOM; CLU_810346_0_0_1; -.
DR InParanoid; Q700D0; -.
DR OMA; CKCINCK; -.
DR OrthoDB; 704611at2759; -.
DR PhylomeDB; Q700D0; -.
DR PRO; PR:Q700D0; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q700D0; baseline and differential.
DR Genevisible; Q700D0; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0000987; F:cis-regulatory region sequence-specific DNA binding; IPI:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR005172; CRC.
DR InterPro; IPR028307; Lin-54_fam.
DR InterPro; IPR033467; Tesmin/TSO1-like_CXC.
DR PANTHER; PTHR12446; PTHR12446; 2.
DR Pfam; PF03638; TCR; 2.
DR SMART; SM01114; CXC; 2.
DR PROSITE; PS51634; CRC; 1.
PE 1: Evidence at protein level;
KW Developmental protein; Metal-binding; Nucleus; Reference proteome; Zinc.
FT CHAIN 1..368
FT /note="Protein tesmin/TSO1-like CXC 8"
FT /id="PRO_0000418173"
FT DOMAIN 64..185
FT /note="CRC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00971"
SQ SEQUENCE 368 AA; 41200 MW; 26CA422B8F0440F1 CRC64;
MTGNADSGKI ATEKDPRKLV FTKLEVSPVF RESPVKELPL FPPISREHSE AKDKTDEEGI
TSRKHKGCRC KQSKCLKLYC DCFASGVVCT DCDCVDCHNN SEKCDAREAA MVNVLGRNPN
AFSEKALGSL TDNQCKAAPD TKPGLLSRGC KCKRTRCLKK YCECFQANLL CSDNCKCINC
KNVSEAFQPP AFSAHNSPQV YRRRRDRELT EWNSCPAPLF SIPDNSIQNA LGSPMSCSPK
LPYRKKRSLM GYTSTLLPDL GDLCSLLVAA SESATTTAED QNRIFTKPDD KEAIELSSES
ESRNVEEEIQ SRGRLIELID VQYNGEEDSQ CKTKTSVNET DIYMEQERAV LETFRDCLQK
FIKSRLES