SMXL3_ARATH
ID SMXL3_ARATH Reviewed; 815 AA.
AC Q9SVD0;
DT 16-MAR-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 128.
DE RecName: Full=Protein SMAX1-LIKE 3 {ECO:0000303|PubMed:23893171};
DE Short=AtSMXL3 {ECO:0000303|PubMed:23893171};
GN Name=SMXL3 {ECO:0000303|PubMed:23893171};
GN OrderedLocusNames=At3g52490 {ECO:0000312|Araport:AT3G52490};
GN ORFNames=F22O6.130 {ECO:0000312|EMBL:CAB43425.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP TISSUE SPECIFICITY, INDUCTION BY STRIGOLACTONE, GENE FAMILY, AND
RP NOMENCLATURE.
RX PubMed=23893171; DOI=10.1104/pp.113.221259;
RA Stanga J.P., Smith S.M., Briggs W.R., Nelson D.C.;
RT "SUPPRESSOR OF MORE AXILLARY GROWTH2 1 controls seed germination and
RT seedling development in Arabidopsis.";
RL Plant Physiol. 163:318-330(2013).
RN [5]
RP REVIEW.
RX PubMed=25179782; DOI=10.1016/j.pbi.2014.08.001;
RA Bennett T., Leyser O.;
RT "Strigolactone signalling: standing on the shoulders of DWARFs.";
RL Curr. Opin. Plant Biol. 22:7-13(2014).
CC -!- FUNCTION: May function in a transcriptional corepressor complex.
CC {ECO:0000250|UniProtKB:Q9FHH2}.
CC -!- SUBUNIT: Interacts probably with TPL/TPR in an EAR-motif dependent
CC manner. {ECO:0000250|UniProtKB:Q9FHH2}.
CC -!- TISSUE SPECIFICITY: Expressed in roots and seedlings.
CC {ECO:0000269|PubMed:23893171}.
CC -!- INDUCTION: Up-regulated by strigolactone treatment.
CC {ECO:0000269|PubMed:23893171}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family. {ECO:0000305}.
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DR EMBL; AL050300; CAB43425.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78951.1; -; Genomic_DNA.
DR EMBL; BT011695; AAS49058.1; -; mRNA.
DR PIR; T08450; T08450.
DR RefSeq; NP_190817.1; NM_115109.4.
DR AlphaFoldDB; Q9SVD0; -.
DR STRING; 3702.AT3G52490.1; -.
DR iPTMnet; Q9SVD0; -.
DR PaxDb; Q9SVD0; -.
DR PRIDE; Q9SVD0; -.
DR ProteomicsDB; 234475; -.
DR EnsemblPlants; AT3G52490.1; AT3G52490.1; AT3G52490.
DR GeneID; 824414; -.
DR Gramene; AT3G52490.1; AT3G52490.1; AT3G52490.
DR KEGG; ath:AT3G52490; -.
DR Araport; AT3G52490; -.
DR TAIR; locus:2079904; AT3G52490.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_006575_0_0_1; -.
DR InParanoid; Q9SVD0; -.
DR OMA; MRCKSGH; -.
DR OrthoDB; 394282at2759; -.
DR PhylomeDB; Q9SVD0; -.
DR PRO; PR:Q9SVD0; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SVD0; baseline and differential.
DR Gene3D; 1.10.1780.10; -; 1.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF02861; Clp_N; 2.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF81923; SSF81923; 1.
DR PROSITE; PS51903; CLP_R; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; Transcription; Transcription regulation.
FT CHAIN 1..815
FT /note="Protein SMAX1-LIKE 3"
FT /id="PRO_0000435712"
FT DOMAIN 8..171
FT /note="Clp R"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 12..80
FT /note="Repeat 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 99..171
FT /note="Repeat 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 750..769
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 778..782
FT /note="EAR"
FT /evidence="ECO:0000305"
SQ SEQUENCE 815 AA; 89943 MW; 69B04100CE228B97 CRC64;
MRAGGCTVEQ ALTADAANVV KQAMGLARRR GHAQVTPLHV ASTMLSAPTG LLRTACLQSH
THPLQCRALE LCFNVALNRL PTSTGSPMLG VPTSPFPSIS NALGAAFKRA QAHQRRGSIE
SQQQPILAVK IEVEQLIISI LDDPSVSRVM REAGFSSPQV KTKVEQAVSL EICSKTTSSS
KPKEGKLLTP VRNEDVMNVI NNLVDKKRRN FVIVGECLAT IDGVVKTVME KVDKKDVPEV
LKDVKFITLS FSSFGQPSRA DVERKLEELE TLVKSCVGKG VILNLGDLNW FVESRTRGSS
LYNNNDSYCV VEHMIMEIGK LACGLVMGDH GRFWLMGLAT SQTYVRCKSG QPSLESLWCL
TTLTIPATSN SLRLSLVSES ELEVKKSENV SLQLQQSSDQ LSFCEECSVK FESEARFLKS
SNSNVTTVAL PAWLQQYKKE NQNSHTDSDS IKELVVKWNS ICDSIHKRPS LKTLTLSSPT
SSFSGSTQPS ISTLHHLQTN GDWPVIETNT HRHHSVVHET SHLRLFIPEH DSEQKTELVC
SNPNSTMNSE ASSSDAMELE HASSRFKEMN AENLATLCAA LESKVPWQKD LVPELAKTVL
KCRSGSSTRK INGNEDKKED TWMFFQGLDV DAKEKIAREL AKLVFGSQDS FVSICLSSFS
STRSDSAEDL RNKRLRDEQS LSYIERFSEA VSLDPNRVIL VEDIEQADYL SQVGFKRAVE
RGRVCNSSGE EASLKDAIVI LSCERFRSRS RACSPPSNQK SDGSDQPEDK NVATCVALDL
NLSIDSAYVC EEESCDEIGL LEAVDARFHF KCSST
