RT4I1_DANRE
ID RT4I1_DANRE Reviewed; 387 AA.
AC Q7T3C7;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 2.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Reticulon-4-interacting protein 1 homolog, mitochondrial;
DE Flags: Precursor;
GN Name=rtn4ip1;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP FUNCTION.
RX PubMed=26593267; DOI=10.1016/j.ajhg.2015.09.012;
RA Angebault C., Guichet P.O., Talmat-Amar Y., Charif M., Gerber S.,
RA Fares-Taie L., Gueguen N., Halloy F., Moore D., Amati-Bonneau P., Manes G.,
RA Hebrard M., Bocquet B., Quiles M., Piro-Megy C., Teigell M., Delettre C.,
RA Rossel M., Meunier I., Preising M., Lorenz B., Carelli V., Chinnery P.F.,
RA Yu-Wai-Man P., Kaplan J., Roubertie A., Barakat A., Bonneau D., Reynier P.,
RA Rozet J.M., Bomont P., Hamel C.P., Lenaers G.;
RT "Recessive mutations in RTN4IP1 cause isolated and syndromic optic
RT neuropathies.";
RL Am. J. Hum. Genet. 97:754-760(2015).
CC -!- FUNCTION: Plays a role in the regulation of retinal ganglion cell (RGC)
CC maturation, neurite outgrowth, and hence in the development of the
CC inner retina and optic nerve (PubMed:26593267). Appears to be a potent
CC inhibitor of regeneration following spinal cord injury (By similarity).
CC {ECO:0000250|UniProtKB:Q924D0, ECO:0000269|PubMed:26593267}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion outer membrane
CC {ECO:0000250|UniProtKB:Q8WWV3}.
CC -!- SIMILARITY: Belongs to the zinc-containing alcohol dehydrogenase
CC family. Quinone oxidoreductase subfamily. {ECO:0000305}.
CC -!- CAUTION: It is uncertain whether Met-1 or Met-3 is the initiator.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH53171.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; BC053171; AAH53171.1; ALT_INIT; mRNA.
DR RefSeq; NP_956646.1; NM_200352.1.
DR AlphaFoldDB; Q7T3C7; -.
DR SMR; Q7T3C7; -.
DR STRING; 7955.ENSDARP00000040031; -.
DR PaxDb; Q7T3C7; -.
DR GeneID; 393323; -.
DR KEGG; dre:393323; -.
DR CTD; 84816; -.
DR ZFIN; ZDB-GENE-040426-1314; rtn4ip1.
DR eggNOG; KOG1198; Eukaryota.
DR InParanoid; Q7T3C7; -.
DR OrthoDB; 727365at2759; -.
DR PhylomeDB; Q7T3C7; -.
DR PRO; PR:Q7T3C7; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005741; C:mitochondrial outer membrane; ISS:UniProtKB.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0042462; P:eye photoreceptor cell development; IMP:ZFIN.
DR GO; GO:0050773; P:regulation of dendrite development; ISS:UniProtKB.
DR GO; GO:0010842; P:retina layer formation; IMP:UniProtKB.
DR CDD; cd08248; RTN4I1; 1.
DR InterPro; IPR013154; ADH_N.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR037397; RTN4I1.
DR Pfam; PF08240; ADH_N; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 2: Evidence at transcript level;
KW Membrane; Mitochondrion; Mitochondrion outer membrane; Neurogenesis;
KW Reference proteome; Transit peptide.
FT TRANSIT 1..27
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 28..387
FT /note="Reticulon-4-interacting protein 1 homolog,
FT mitochondrial"
FT /id="PRO_0000042255"
SQ SEQUENCE 387 AA; 42328 MW; FAA0B7C5CDABAEE3 CRC64;
MLMCRRWLVC SLRCHYRSFS FSAARRTVMP AWVIDKYGKN DVLRFTKNAA LPIIHYPNEV
VVKVHAAGLN PIDISMRGGY GAATMAMKRD PLNISQSGGE FPLILGRDVS GEIMECGLDV
KYFKPGDQVW AAIPPWKQGS LAEFVVVSGN EVSHKPKSLR HDEAASIPYV AATAWSAIVN
TGGLNKDNSA KKRVLILGGS GGVGTFAIQM VKAWGAHVTV TCSQNAERLV RDLGADDVVD
YTAGPVEKQL KNLEKFDLIL DSIGGETEKW ALDLLKPWSG AKFVTLITPF LQNTDRLGLA
DGMMQSAVTV GCKVVKNLRK GVHYRWGFFA PSGSALDEVS EMVDAGKVRP VVEEVFSFAQ
VPEAFQKVEQ GHARGKTVVS IMEDQKE