RS4E_THEAC
ID RS4E_THEAC Reviewed; 235 AA.
AC Q56230;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 16-NOV-2001, sequence version 2.
DT 25-MAY-2022, entry version 115.
DE RecName: Full=30S ribosomal protein S4e;
GN Name=rps4e; OrderedLocusNames=Ta1259;
OS Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC
OS 15155 / AMRC-C165).
OC Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales;
OC Thermoplasmataceae; Thermoplasma.
OX NCBI_TaxID=273075;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Thomas N.A., Jarrell K.F.;
RT "Nucleotide sequence of the ribosomal protein genes S4e and L5 in the
RT archaeon Thermoplasma acidophilum.";
RL Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165;
RX PubMed=11029001; DOI=10.1038/35035069;
RA Ruepp A., Graml W., Santos-Martinez M.-L., Koretke K.K., Volker C.,
RA Mewes H.-W., Frishman D., Stocker S., Lupas A.N., Baumeister W.;
RT "The genome sequence of the thermoacidophilic scavenger Thermoplasma
RT acidophilum.";
RL Nature 407:508-513(2000).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS4 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB02244.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=CAC12383.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; U57643; AAB02244.1; ALT_INIT; Genomic_DNA.
DR EMBL; AL445067; CAC12383.1; ALT_INIT; Genomic_DNA.
DR PIR; T37467; T37467.
DR RefSeq; WP_048162044.1; NC_002578.1.
DR PDB; 3KBG; X-ray; 1.75 A; A=31-235.
DR PDBsum; 3KBG; -.
DR AlphaFoldDB; Q56230; -.
DR SMR; Q56230; -.
DR STRING; 273075.Ta1259; -.
DR PRIDE; Q56230; -.
DR DNASU; 1456748; -.
DR EnsemblBacteria; CAC12383; CAC12383; CAC12383.
DR GeneID; 1456748; -.
DR KEGG; tac:Ta1259; -.
DR eggNOG; arCOG04093; Archaea.
DR HOGENOM; CLU_060400_0_0_2; -.
DR OMA; FPVGLMD; -.
DR OrthoDB; 89943at2157; -.
DR EvolutionaryTrace; Q56230; -.
DR Proteomes; UP000001024; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd06087; KOW_RPS4; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 2.40.50.740; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_00485; Ribosomal_S4e; 1.
DR InterPro; IPR041982; KOW_RPS4.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR000876; Ribosomal_S4e.
DR InterPro; IPR013845; Ribosomal_S4e_central_region.
DR InterPro; IPR038237; Ribosomal_S4e_central_sf.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11581; PTHR11581; 1.
DR Pfam; PF00900; Ribosomal_S4e; 1.
DR Pfam; PF01479; S4; 1.
DR PIRSF; PIRSF002116; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..235
FT /note="30S ribosomal protein S4e"
FT /id="PRO_0000130865"
FT DOMAIN 38..99
FT /note="S4 RNA-binding"
FT HELIX 40..49
FT /evidence="ECO:0007829|PDB:3KBG"
FT TURN 50..52
FT /evidence="ECO:0007829|PDB:3KBG"
FT HELIX 54..56
FT /evidence="ECO:0007829|PDB:3KBG"
FT HELIX 57..62
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 66..68
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 85..88
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 91..97
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 103..107
FT /evidence="ECO:0007829|PDB:3KBG"
FT HELIX 112..114
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 115..126
FT /evidence="ECO:0007829|PDB:3KBG"
FT HELIX 127..129
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 130..135
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 140..143
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 153..157
FT /evidence="ECO:0007829|PDB:3KBG"
FT TURN 158..160
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 163..167
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 174..177
FT /evidence="ECO:0007829|PDB:3KBG"
FT TURN 181..184
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 186..192
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 202..205
FT /evidence="ECO:0007829|PDB:3KBG"
FT TURN 206..208
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 209..212
FT /evidence="ECO:0007829|PDB:3KBG"
FT HELIX 213..215
FT /evidence="ECO:0007829|PDB:3KBG"
FT STRAND 216..220
FT /evidence="ECO:0007829|PDB:3KBG"
SQ SEQUENCE 235 AA; 26266 MW; E3B81B6B1CA123C6 CRC64;
MINKTKRLMV SRQVKIPRKT YFWGPTPNPG MHPKDQSVTL LSIIRDYLKL SDKEREAARI
LANGLVKVDG KTVREKKFAV GFMDVIEING ESYRVVYNDQ GALVLMKETK ERASMKLLKV
RSKVIAPGNR IQLGTHDGRT FITDDKSKKV GDVWAVSVPD MKISEIIKMQ PGNKAYITAG
SHVNQTGTIS KIEAKEGSSA NLVHFQEGFS TIKDHVFMIG SSKFSFVLSP EEVIP
