RS14Z_PYRAB
ID RS14Z_PYRAB Reviewed; 56 AA.
AC P62012; G8ZHW1; O74093;
DT 07-JUN-2004, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2004, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=30S ribosomal protein S14 type Z {ECO:0000255|HAMAP-Rule:MF_01364};
GN Name=rps14 {ECO:0000255|HAMAP-Rule:MF_01364}; OrderedLocusNames=PYRAB03270;
GN ORFNames=PAB7080;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: Binds 16S rRNA, required for the assembly of 30S particles.
CC {ECO:0000255|HAMAP-Rule:MF_01364}.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01364};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000255|HAMAP-Rule:MF_01364};
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01364}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS14 family.
CC Zinc-binding uS14 subfamily. {ECO:0000255|HAMAP-Rule:MF_01364}.
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DR EMBL; AJ248284; CAB49249.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE69704.1; -; Genomic_DNA.
DR PIR; B75146; B75146.
DR RefSeq; WP_010867449.1; NC_000868.1.
DR PDB; 6SW9; EM; 4.20 A; P=1-56.
DR PDB; 6SWC; EM; 3.30 A; P=1-56.
DR PDB; 6SWE; EM; 3.10 A; P=1-56.
DR PDBsum; 6SW9; -.
DR PDBsum; 6SWC; -.
DR PDBsum; 6SWE; -.
DR AlphaFoldDB; P62012; -.
DR SMR; P62012; -.
DR STRING; 272844.PAB7080; -.
DR EnsemblBacteria; CAB49249; CAB49249; PAB7080.
DR GeneID; 43447550; -.
DR GeneID; 55642644; -.
DR GeneID; 59388073; -.
DR KEGG; pab:PAB7080; -.
DR PATRIC; fig|272844.11.peg.348; -.
DR eggNOG; arCOG00782; Archaea.
DR HOGENOM; CLU_177289_2_2_2; -.
DR OMA; HCFREIA; -.
DR PhylomeDB; P62012; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.830.10; -; 1.
DR HAMAP; MF_01364_A; Ribosomal_S14_2_A; 1.
DR InterPro; IPR039744; 40S_S29/30S_S14z.
DR InterPro; IPR001209; Ribosomal_S14.
DR InterPro; IPR043140; Ribosomal_S14/S29.
DR InterPro; IPR018271; Ribosomal_S14_CS.
DR InterPro; IPR023676; Ribosomal_S14_type-Z_arc.
DR PANTHER; PTHR12010; PTHR12010; 1.
DR Pfam; PF00253; Ribosomal_S14; 1.
DR PROSITE; PS00527; RIBOSOMAL_S14; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Metal-binding; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding; Zinc.
FT CHAIN 1..56
FT /note="30S ribosomal protein S14 type Z"
FT /id="PRO_0000130995"
FT BINDING 21
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01364"
FT BINDING 24
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01364"
FT BINDING 39
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01364"
FT BINDING 42
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01364"
FT STRAND 5..7
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 13..15
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 16..18
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 22..24
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 28..30
FT /evidence="ECO:0007829|PDB:6SWC"
FT HELIX 33..35
FT /evidence="ECO:0007829|PDB:6SWC"
FT HELIX 40..43
FT /evidence="ECO:0007829|PDB:6SWE"
FT TURN 44..46
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 47..50
FT /evidence="ECO:0007829|PDB:6SWE"
SQ SEQUENCE 56 AA; 6626 MW; B5D97E9E2841F686 CRC64;
MAKADYNKRK PRKFGKGARR CIRCGQYGPI IRIHGLMLCR HCFREVAPKL GFRKYE