AUG6_ARATH
ID AUG6_ARATH Reviewed; 741 AA.
AC Q94BP7; Q9FM25;
DT 14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=AUGMIN subunit 6 {ECO:0000303|PubMed:22505726};
GN Name=AUG6 {ECO:0000303|PubMed:22505726};
GN OrderedLocusNames=At5g40740 {ECO:0000312|Araport:AT5G40740};
GN ORFNames=MNF13.29 {ECO:0000312|EMBL:BAB08545.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:AAK64148.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP IDENTIFICATION IN THE AUGMIN COMPLEX BY MASS SPECTROMETRY, AND SUBCELLULAR
RP LOCATION.
RX PubMed=22505726; DOI=10.1105/tpc.112.096610;
RA Hotta T., Kong Z., Ho C.M., Zeng C.J., Horio T., Fong S., Vuong T.,
RA Lee Y.R., Liu B.;
RT "Characterization of the Arabidopsis augmin complex uncovers its critical
RT function in the assembly of the acentrosomal spindle and phragmoplast
RT microtubule arrays.";
RL Plant Cell 24:1494-1509(2012).
CC -!- FUNCTION: Contributes to the assembly of the acentrosomal spindle and
CC phragmoplast microtubule arrays as part of the augmin complex.
CC {ECO:0000305|PubMed:22505726}.
CC -!- SUBUNIT: Part of the augmin complex composed of 8 subunits. The complex
CC acts on microtubules and interacts with gamma-tubulin in spindles and
CC the phragmoplast. {ECO:0000269|PubMed:22505726}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, spindle
CC {ECO:0000269|PubMed:22505726}. Cytoplasm, cytoskeleton, phragmoplast
CC {ECO:0000269|PubMed:22505726}. Note=Preferentially localizes to
CC microtubules minus ends. {ECO:0000269|PubMed:22505726}.
CC -!- SIMILARITY: Belongs to the HAUS6 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB08545.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB009052; BAB08545.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED94589.1; -; Genomic_DNA.
DR EMBL; AY039971; AAK64148.1; -; mRNA.
DR EMBL; AY079386; AAL85117.1; -; mRNA.
DR RefSeq; NP_568585.1; NM_123439.4.
DR AlphaFoldDB; Q94BP7; -.
DR SMR; Q94BP7; -.
DR STRING; 3702.AT5G40740.1; -.
DR iPTMnet; Q94BP7; -.
DR PaxDb; Q94BP7; -.
DR PRIDE; Q94BP7; -.
DR ProteomicsDB; 240916; -.
DR EnsemblPlants; AT5G40740.1; AT5G40740.1; AT5G40740.
DR GeneID; 834074; -.
DR Gramene; AT5G40740.1; AT5G40740.1; AT5G40740.
DR KEGG; ath:AT5G40740; -.
DR Araport; AT5G40740; -.
DR TAIR; locus:2168828; AT5G40740.
DR eggNOG; ENOG502QUMJ; Eukaryota.
DR HOGENOM; CLU_023157_0_0_1; -.
DR InParanoid; Q94BP7; -.
DR OMA; ARGHPTI; -.
DR OrthoDB; 259004at2759; -.
DR PhylomeDB; Q94BP7; -.
DR PRO; PR:Q94BP7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q94BP7; baseline and differential.
DR Genevisible; Q94BP7; AT.
DR GO; GO:0070652; C:HAUS complex; IEA:InterPro.
DR GO; GO:1990498; C:mitotic spindle microtubule; IBA:GO_Central.
DR GO; GO:0009524; C:phragmoplast; IDA:TAIR.
DR GO; GO:0005819; C:spindle; IDA:TAIR.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR GO; GO:0051011; F:microtubule minus-end binding; IDA:TAIR.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0009561; P:megagametogenesis; IMP:TAIR.
DR GO; GO:0055046; P:microgametogenesis; IMP:TAIR.
DR GO; GO:0000226; P:microtubule cytoskeleton organization; IMP:TAIR.
DR GO; GO:0051225; P:spindle assembly; IEA:InterPro.
DR InterPro; IPR026797; HAUS_6.
DR InterPro; IPR028163; HAUS_6_N.
DR PANTHER; PTHR16151; PTHR16151; 1.
DR Pfam; PF14661; HAUS6_N; 1.
PE 1: Evidence at protein level;
KW Cell cycle; Cell division; Coiled coil; Cytoplasm; Cytoskeleton;
KW Microtubule; Mitosis; Reference proteome.
FT CHAIN 1..741
FT /note="AUGMIN subunit 6"
FT /id="PRO_0000434097"
FT REGION 313..335
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 520..578
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 213..239
FT /evidence="ECO:0000255"
FT COMPBIAS 319..333
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 741 AA; 80935 MW; EF2E940CA79D28F3 CRC64;
MTMDREKERE LELESAMYTN CLLLGLDPNV IGLGASNGTP RVGLFRHSNP KLGEQLLYFI
LSSLRGPAQS SKDFDKVWPI FDSAQSRDFR KVVQAIISEL ESQGALPRSN SRVSSLATCC
GPRFVELLWQ LSLHALREVH RRTFPADVAS NPLPSSLTDV SFSHAATLLP VTKARIVLER
RRFLKNAETA VQRQAMWSNL AHEMTAEFRG LCAEEAYLQQ ELEKLNDLRN KVKQEGEVWD
DLVSSSSQNS HLVSKATRLW DSIMARKGQH EVLASGPIED LIAHREHRYR ISGSALLAAM
DQSSQVPRAE LLSAHSDDSA SLADDKELSD GSYTNMHDHS LVDSFETASS QASDETLSRV
DDRGGKINQT VDVAEVIRRW THALQRIHKQ SLLLAKANDG DGPDILRTAS DGGTSGHVES
LAATLTEHQQ HLASFQVLIN QLKEVSPAIQ KSISECTEMV NSLPPTLPPV TRSNGQASSL
LQSQGSGRIM EGVSNDVAEL TSTMSNVQLE KVSASPTLKL PQLFSSTPTS SGKGGNGQKR
QTMASQVNKM ESLSEKNSTD QALSNARPDN LPTDTSSSFV HNLKKSVREA ALLIPSSAGS
SRDSQSDEGS EHYFVPLSAT GFSRFPSETK ALPLRGSRAL TSLSEPSFLE PNVPDSFAPS
KYSDIPDTYD DLDSFKDYDN GNGFLSVAGS NSVASDAQQS FYDIDDQVFS PPLLMDSSLL
SDAYEDLLAP LSETEAALME H