RPC3_DICDI
ID RPC3_DICDI Reviewed; 666 AA.
AC Q55FJ5;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=DNA-directed RNA polymerase III subunit rpc3;
DE Short=RNA polymerase III subunit C3;
DE AltName: Full=DNA-directed RNA polymerase III subunit C;
GN Name=polr3c; Synonyms=rpc3; ORFNames=DDB_G0268080;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC Specific core component of RNA polymerase III which synthesizes small
CC RNAs, such as 5S rRNA and tRNAs (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the RNA polymerase III (Pol III) complex
CC consisting of 17 subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPC3/POLR3C RNA polymerase
CC subunit family. {ECO:0000305}.
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DR EMBL; AAFI02000003; EAL73493.1; -; Genomic_DNA.
DR RefSeq; XP_647538.1; XM_642446.1.
DR AlphaFoldDB; Q55FJ5; -.
DR SMR; Q55FJ5; -.
DR STRING; 44689.DDB0216314; -.
DR PaxDb; Q55FJ5; -.
DR EnsemblProtists; EAL73493; EAL73493; DDB_G0268080.
DR GeneID; 8616345; -.
DR KEGG; ddi:DDB_G0268080; -.
DR dictyBase; DDB_G0268080; rpc3.
DR eggNOG; KOG2587; Eukaryota.
DR HOGENOM; CLU_023294_1_1_1; -.
DR InParanoid; Q55FJ5; -.
DR OMA; NPAFTFF; -.
DR PhylomeDB; Q55FJ5; -.
DR Reactome; R-DDI-76061; RNA Polymerase III Transcription Initiation From Type 1 Promoter.
DR Reactome; R-DDI-76066; RNA Polymerase III Transcription Initiation From Type 2 Promoter.
DR PRO; PR:Q55FJ5; -.
DR Proteomes; UP000002195; Chromosome 1.
DR GO; GO:0005666; C:RNA polymerase III complex; ISS:dictyBase.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 4.
DR InterPro; IPR013197; RNA_pol_III_RPC82-rel_HTH.
DR InterPro; IPR039748; RPC3.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12949; PTHR12949; 2.
DR Pfam; PF08221; HTH_9; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleus; Reference proteome; Transcription.
FT CHAIN 1..666
FT /note="DNA-directed RNA polymerase III subunit rpc3"
FT /id="PRO_0000330756"
FT REGION 179..228
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 250..307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 320..371
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 250..289
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 666 AA; 75335 MW; A83E5E6463D700AF CRC64;
MYEQKVAIDI VKESFGDDVT KVFEFLVQRG KSSYKIINQS LSGKGGLTIK RIKQCLLVLI
QHNLVTYEEF LLPLTKDEIE KLVPGEPLPS DSVYEAIIVN AIHRLRFPKF INYIKHSKGD
EAAYILEELI DHGRLPMDLL IKQASQIQRV DTFEDQDDIT KRFEDTFTKL IMDQFIMRAP
RPRPVSDQET SNALSKEAKK VGGGGANGNN VGAHQKKDSD PFALPSVGFS SNGPLSSVDN
SANDAESLEI LTGKSSTTTI PSQPKKGTAK KTSAKPKSTA INTTATASLG RKRKSRDIYD
EDDDEEPDLL VIEENVEINV NDHNSANKNS TTTTTTTTTK TGQHTLKKSK LDQSSSTTTT
SSRQQQNGMD QQRIIDESRV LWTINYEQFI IEFKLKACYD FVTEKNNQQS GLLFNAMVKL
CKRSIRSNQD SLTSCVYGEN ILEEYNRDLD SSKKMDKLQI EKYLSIMQAS RPSMVTKMVS
KSKQSSSSEL GAYQVNVGNI IGIIKQKMVE SIIKQKFGDN GLRVFKLLLI KNLLEPKQIA
ELAMIPPNEC KALLFNMMQK NIIRLQEIPR SSDHFANRTF YLFFVDLPTI IATFTEDIFK
AIYNTRERLK SELEPHKDAL EKLTQLDEDQ ITEDQAKIYK KTDRITQTLL TVILNLDNDL
LHLYSF