RNH2B_XENTR
ID RNH2B_XENTR Reviewed; 306 AA.
AC Q28GD9; Q0IIW0;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=Ribonuclease H2 subunit B;
DE Short=RNase H2 subunit B;
DE AltName: Full=Ribonuclease HI subunit B;
GN Name=rnaseh2b; ORFNames=TEgg013b21.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Egg;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=N6; TISSUE=Oviduct;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Non catalytic subunit of RNase H2, an endonuclease that
CC specifically degrades the RNA of RNA:DNA hybrids. Participates in DNA
CC replication, possibly by mediating the removal of lagging-strand
CC Okazaki fragment RNA primers during DNA replication. Mediates the
CC excision of single ribonucleotides from DNA:RNA duplexes (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: The RNase H2 complex is a heterotrimer composed of the
CC catalytic subunit rnaseh2a and the non-catalytic subunits rnaseh2b and
CC rnaseh2c. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RNase H2 subunit B family. {ECO:0000305}.
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DR EMBL; CR761427; CAJ82251.1; -; mRNA.
DR EMBL; BC121543; AAI21544.1; -; mRNA.
DR RefSeq; NP_001016329.1; NM_001016329.2.
DR AlphaFoldDB; Q28GD9; -.
DR SMR; Q28GD9; -.
DR STRING; 8364.ENSXETP00000037200; -.
DR PaxDb; Q28GD9; -.
DR DNASU; 549083; -.
DR GeneID; 549083; -.
DR KEGG; xtr:549083; -.
DR CTD; 79621; -.
DR Xenbase; XB-GENE-1004443; rnaseh2b.
DR eggNOG; KOG4705; Eukaryota.
DR HOGENOM; CLU_059802_0_0_1; -.
DR InParanoid; Q28GD9; -.
DR OrthoDB; 1092212at2759; -.
DR Proteomes; UP000008143; Chromosome 2.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000020720; Expressed in testis and 14 other tissues.
DR ExpressionAtlas; Q28GD9; baseline.
DR GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR GO; GO:0032299; C:ribonuclease H2 complex; ISS:UniProtKB.
DR GO; GO:0009259; P:ribonucleotide metabolic process; IBA:GO_Central.
DR GO; GO:0006401; P:RNA catabolic process; ISS:UniProtKB.
DR CDD; cd09270; RNase_H2-B; 1.
DR InterPro; IPR040456; RNase_H2_suB.
DR InterPro; IPR019024; RNase_H2_suB_wHTH.
DR InterPro; IPR041195; Rnh202_N.
DR PANTHER; PTHR13383; PTHR13383; 1.
DR Pfam; PF09468; RNase_H2-Ydr279; 1.
DR Pfam; PF17745; Ydr279_N; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..306
FT /note="Ribonuclease H2 subunit B"
FT /id="PRO_0000248382"
FT REGION 232..285
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..269
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 306 AA; 34447 MW; F73C73905F7DF6A9 CRC64;
MVSRRQRPGS GQSEQWVLLA PESLSDDAKN LSDKTIFAKL RAPCTDKGSM FLFIDSGQQI
CEVKAFHEEY RSWFIGQTVQ QDGRLLIATP IDPMFLVLHY LIKADKEQGK FQPVEQIVVD
EEFPSCSMLL QCTPVSKSLH HVTEEKEIGS KKFYKYSKEK TLVWLKKKVE LTVKVLKSSN
ICVGGGVQSA TFIRNTQGSD VKEEDYTRYA HGLISEYLTE DLREDLSKYL GLPDLSSPTP
EPPVKKRKVS EAPVEAEEDY TKFNSDSKNK KSNSKMTAAQ KSLAKVDKSG MKNISAFFSP
KAKATK