RL21_AFIC5
ID RL21_AFIC5 Reviewed; 164 AA.
AC B6JD24; F8BTB6;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363};
GN Name=rplU {ECO:0000255|HAMAP-Rule:MF_01363};
GN OrderedLocusNames=OCAR_4610, OCA5_c33340;
OS Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)
OS (Oligotropha carboxidovorans).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Afipia.
OX NCBI_TaxID=504832;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX PubMed=18539730; DOI=10.1128/jb.00614-08;
RA Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.;
RT "Genome sequence of the chemolithoautotrophic bacterium Oligotropha
RT carboxidovorans OM5T.";
RL J. Bacteriol. 190:5531-5532(2008).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX PubMed=21742883; DOI=10.1128/jb.05619-11;
RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G.,
RA Meyer O.;
RT "Complete genome sequences of the chemolithoautotrophic Oligotropha
RT carboxidovorans strains OM4 and OM5.";
RL J. Bacteriol. 193:5043-5043(2011).
CC -!- FUNCTION: This protein binds to 23S rRNA in the presence of protein
CC L20. {ECO:0000255|HAMAP-Rule:MF_01363}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Contacts protein L20.
CC {ECO:0000255|HAMAP-Rule:MF_01363}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL21 family.
CC {ECO:0000255|HAMAP-Rule:MF_01363}.
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DR EMBL; CP001196; ACI91754.1; -; Genomic_DNA.
DR EMBL; CP002826; AEI08008.1; -; Genomic_DNA.
DR RefSeq; WP_012561785.1; NC_015684.1.
DR AlphaFoldDB; B6JD24; -.
DR SMR; B6JD24; -.
DR STRING; 504832.OCAR_4610; -.
DR EnsemblBacteria; AEI08008; AEI08008; OCA5_c33340.
DR KEGG; oca:OCAR_4610; -.
DR KEGG; ocg:OCA5_c33340; -.
DR PATRIC; fig|504832.7.peg.3504; -.
DR eggNOG; COG0261; Bacteria.
DR HOGENOM; CLU_061463_1_2_5; -.
DR OMA; HRQEITR; -.
DR OrthoDB; 1949059at2; -.
DR Proteomes; UP000007730; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01363; Ribosomal_L21; 1.
DR InterPro; IPR036164; L21-like_sf.
DR InterPro; IPR028909; L21p-like.
DR InterPro; IPR001787; Ribosomal_L21.
DR PANTHER; PTHR21349; PTHR21349; 1.
DR Pfam; PF00829; Ribosomal_L21p; 1.
DR SUPFAM; SSF141091; SSF141091; 1.
DR TIGRFAMs; TIGR00061; L21; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..164
FT /note="50S ribosomal protein L21"
FT /id="PRO_1000143828"
FT REGION 105..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 108..134
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 164 AA; 17415 MW; 6CA9AC5692E22753 CRC64;
MFAVIKTGGR QFRVVPNDVL EIGKITGDVG TIVQLGEVMA VGGDTPVLGF PFIEGASVAA
EILDHKRGPK VIAFKKRRRK NSKRKRGYRD EITVIRVTEI LTDDKAPTIG PRAKKEKKVE
AAPADGEAPA KKAPAKKAAA KKAAPKAAAK KAPAKKAAPK AKSE