RIP4_ORYSJ
ID RIP4_ORYSJ Reviewed; 216 AA.
AC Q9FWU1; A3C5Z9; Q109H3; Q7XD56;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 14-NOV-2006, sequence version 2.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Putative ripening-related protein 4;
DE Flags: Precursor;
GN OrderedLocusNames=Os10g0490666, Os10g0490600, LOC_Os10g34902;
GN ORFNames=OsJ_31984 {ECO:0000312|EMBL:EAZ16512.1}, OSJNBa0051D19.14;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12791992; DOI=10.1126/science.1083523;
RA Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT "In-depth view of structure, activity, and evolution of rice chromosome
RT 10.";
RL Science 300:1566-1569(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the kiwellin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG13534.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC023240; AAG13534.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DP000086; ABG66162.1; -; Genomic_DNA.
DR EMBL; AP014966; BAT11425.1; -; Genomic_DNA.
DR EMBL; CM000147; EAZ16512.1; -; Genomic_DNA.
DR RefSeq; XP_015613997.1; XM_015758511.1.
DR AlphaFoldDB; Q9FWU1; -.
DR SMR; Q9FWU1; -.
DR PaxDb; Q9FWU1; -.
DR PRIDE; Q9FWU1; -.
DR EnsemblPlants; Os10t0490666-00; Os10t0490666-00; Os10g0490666.
DR GeneID; 107277335; -.
DR Gramene; Os10t0490666-00; Os10t0490666-00; Os10g0490666.
DR KEGG; osa:107277335; -.
DR eggNOG; ENOG502RXVH; Eukaryota.
DR HOGENOM; CLU_047639_4_2_1; -.
DR InParanoid; Q9FWU1; -.
DR OMA; TNMANAK; -.
DR OrthoDB; 1360754at2759; -.
DR Proteomes; UP000000763; Chromosome 10.
DR Proteomes; UP000007752; Chromosome 10.
DR Proteomes; UP000059680; Chromosome 10.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR Gene3D; 2.40.40.10; -; 1.
DR InterPro; IPR039271; Kiwellin-like.
DR InterPro; IPR036908; RlpA-like_sf.
DR PANTHER; PTHR33191; PTHR33191; 1.
DR SUPFAM; SSF50685; SSF50685; 1.
PE 3: Inferred from homology;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..25
FT /evidence="ECO:0000255"
FT CHAIN 26..216
FT /note="Putative ripening-related protein 4"
FT /id="PRO_0000045971"
SQ SEQUENCE 216 AA; 22176 MW; 12396DA41E6F8F6D CRC64;
MAANVKVLVV LALLQLMSLH AVVHGGDNGG VSAVATGKHE PKPKQGGGGG GGDGGCHISG
FLHGKAGKCN RAHGSDCCVT GRRYPQFRCS PPVSSARPTP ATLTLNSFAR GGDGGGRSSC
DGRFHPDTAM VVALSSGWLR LDGASRCNRM IRVAAGNGRS ALARVVDECD SVNGCDAEHN
FEPPCPNDVV DGSPAVWKAL GLDEGVGEFK VTWSDV