RGLA_ASPTN
ID RGLA_ASPTN Reviewed; 531 AA.
AC Q0CVU1;
DT 18-MAY-2010, integrated into UniProtKB/Swiss-Prot.
DT 18-MAY-2010, sequence version 2.
DT 25-MAY-2022, entry version 62.
DE RecName: Full=Probable rhamnogalacturonate lyase A;
DE EC=4.2.2.23;
DE Flags: Precursor;
GN Name=rglA; ORFNames=ATEG_02193;
OS Aspergillus terreus (strain NIH 2624 / FGSC A1156).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=341663;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIH 2624 / FGSC A1156;
RA Birren B.W., Lander E.S., Galagan J.E., Nusbaum C., Devon K., Henn M.,
RA Ma L.-J., Jaffe D.B., Butler J., Alvarez P., Gnerre S., Grabherr M.,
RA Kleber M., Mauceli E.W., Brockman W., Rounsley S., Young S.K., LaButti K.,
RA Pushparaj V., DeCaprio D., Crawford M., Koehrsen M., Engels R.,
RA Montgomery P., Pearson M., Howarth C., Larson L., Luoma S., White J.,
RA Alvarado L., Kodira C.D., Zeng Q., Oleary S., Yandava C., Denning D.W.,
RA Nierman W.C., Milne T., Madden K.;
RT "Annotation of the Aspergillus terreus NIH2624 genome.";
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Pectinolytic enzymes consist of four classes of enzymes:
CC pectin lyase, polygalacturonase, pectin methylesterase and
CC rhamnogalacturonase. Degrades the rhamnogalacturonan I (RG-I) backbone
CC of pectin (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endotype eliminative cleavage of L-alpha-rhamnopyranosyl-
CC (1->4)-alpha-D-galactopyranosyluronic acid bonds of
CC rhamnogalacturonan I domains in ramified hairy regions of pectin
CC leaving L-rhamnopyranose at the reducing end and 4-deoxy-4,5-
CC unsaturated D-galactopyranosyluronic acid at the non-reducing end.;
CC EC=4.2.2.23;
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 4 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=EAU37155.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; CH476596; EAU37155.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_001211371.1; XM_001211371.1.
DR AlphaFoldDB; Q0CVU1; -.
DR SMR; Q0CVU1; -.
DR STRING; 341663.Q0CVU1; -.
DR GeneID; 4316943; -.
DR eggNOG; ENOG502QTKY; Eukaryota.
DR OrthoDB; 195455at2759; -.
DR Proteomes; UP000007963; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0102210; F:rhamnogalacturonan endolyase activity; IEA:UniProtKB-EC.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:UniProtKB-KW.
DR CDD; cd10316; RGL4_M; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR029413; RG-lyase_II.
DR InterPro; IPR029411; RG-lyase_III.
DR InterPro; IPR016590; Rhamnogalacturonase_B.
DR InterPro; IPR015364; RhgB_N.
DR PANTHER; PTHR36574; PTHR36574; 1.
DR Pfam; PF14683; CBM-like; 1.
DR Pfam; PF14686; fn3_3; 1.
DR Pfam; PF09284; RhgB_N; 1.
DR PIRSF; PIRSF011794; Rhamnogalacturonase_B; 1.
DR SUPFAM; SSF49452; SSF49452; 1.
DR SUPFAM; SSF49785; SSF49785; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Cell wall biogenesis/degradation; Disulfide bond;
KW Glycoprotein; Lyase; Polysaccharide degradation; Reference proteome;
KW Secreted; Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..531
FT /note="Probable rhamnogalacturonate lyase A"
FT /id="PRO_0000394370"
FT CARBOHYD 351
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 50..93
FT /evidence="ECO:0000250"
FT DISULFID 184..193
FT /evidence="ECO:0000250"
SQ SEQUENCE 531 AA; 56793 MW; 48128630F3AA9DC4 CRC64;
MLSKALFFSS LPLWAKVASA AFGITTTDSS YTIDAGSPNP LKFTVSRSSC DITSINYYGS
ELQYQSKGSH IGSGLGSASV SAVQNGDYIK VTCDTDTLTH YFVVHSGDPI IHMATYITAE
PSIGELRFIA RLNSNLLPNE EPFGDVSTTA GGSAIEGSDV FLVNGQTRSK FYSSQRFIDD
QRHCISGSAH RVCMILNQYE SSSGGPFHRD INSNNGGDYN SLYWYMNSGH VQTESYRMGL
HGPYSMYFSR SGTPGTNIDT SFFANLDIKG YVPASGRGTV TGKASGADSN FKWVVHWYND
AAQYWTYTAS DGSFTSPAMK PGTYTMAYYQ GEYRVAETSV TVSAGSSTTK NISGSVKTGT
TIFKIGDWDG QPTGFLNADK QLRMHPSDSR MSSWGPVTYT VGSSSVGSFP MALFKSVNSP
VTIKFTATSA QTGAATLRIG TTLSFAGGRP QATINSYTGP TPSAPTNLNS RGVTRGAYRG
LGEVYDVSIP AGTIVAGTNT ITINVISGSS GDDFLSPNFV SAYPFLTLMR C