PVDA_BURCE
ID PVDA_BURCE Reviewed; 444 AA.
AC O51940;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=L-ornithine N(5)-monooxygenase {ECO:0000250|UniProtKB:Q51548};
DE EC=1.14.13.195 {ECO:0000250|UniProtKB:Q51548};
DE AltName: Full=L-ornithine N(5)-hydroxylase {ECO:0000250|UniProtKB:Q51548};
DE Short=Ornithine hydroxylase {ECO:0000250|UniProtKB:Q51548};
DE AltName: Full=L-ornithine N(5)-oxygenase {ECO:0000303|PubMed:10456885};
GN Name=pvdA {ECO:0000303|PubMed:10456885};
OS Burkholderia cepacia (Pseudomonas cepacia).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX NCBI_TaxID=292;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, PATHWAY, AND DISRUPTION
RP PHENOTYPE.
RC STRAIN=K56-2;
RX PubMed=10456885; DOI=10.1128/iai.67.9.4443-4455.1999;
RA Sokol P.A., Darling P., Woods D.E., Mahenthiralingam E., Kooi C.;
RT "Role of ornibactin biosynthesis in the virulence of Burkholderia cepacia:
RT characterization of pvdA, the gene encoding L-ornithine N(5)-oxygenase.";
RL Infect. Immun. 67:4443-4455(1999).
CC -!- FUNCTION: Catalyzes the conversion of L-ornithine to N(5)-
CC hydroxyornithine, the first step in the biosynthesis of all
CC hydroxamate-containing siderophores, such as ornibactin.
CC {ECO:0000269|PubMed:10456885}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=L-ornithine + NADPH + O2 = H2O + N(5)-hydroxy-L-ornithine +
CC NADP(+); Xref=Rhea:RHEA:41508, ChEBI:CHEBI:15377, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:46911, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC ChEBI:CHEBI:78275; EC=1.14.13.195;
CC Evidence={ECO:0000250|UniProtKB:Q51548};
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000250|UniProtKB:Q51548};
CC Note=Binds 1 FAD per subunit. {ECO:0000250|UniProtKB:Q51548};
CC -!- PATHWAY: Siderophore biosynthesis; ornibactin biosynthesis.
CC {ECO:0000269|PubMed:10456885}.
CC -!- DISRUPTION PHENOTYPE: Less virulent than wild-type in chronic and acute
CC models of respiratory infection. {ECO:0000269|PubMed:10456885}.
CC -!- SIMILARITY: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-
CC oxygenase family. {ECO:0000305}.
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DR EMBL; AF013993; AAB94515.1; -; Genomic_DNA.
DR AlphaFoldDB; O51940; -.
DR SMR; O51940; -.
DR STRING; 292.DM42_51; -.
DR eggNOG; COG3486; Bacteria.
DR UniPathway; UPA00018; -.
DR GO; GO:0031172; F:ornithine N5-monooxygenase activity; IEA:RHEA.
DR GO; GO:0044249; P:cellular biosynthetic process; IEA:UniProt.
DR GO; GO:1901566; P:organonitrogen compound biosynthetic process; IEA:UniProt.
DR Gene3D; 3.50.50.60; -; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR025700; Lys/Orn_oxygenase.
DR PANTHER; PTHR42802; PTHR42802; 1.
DR Pfam; PF13434; K_oxygenase; 1.
DR SUPFAM; SSF51905; SSF51905; 2.
PE 3: Inferred from homology;
KW FAD; Flavoprotein; Monooxygenase; NADP; Oxidoreductase.
FT CHAIN 1..444
FT /note="L-ornithine N(5)-monooxygenase"
FT /id="PRO_0000204030"
FT REGION 420..444
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 40..48
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 59
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 64
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 125
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 211..214
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 236
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 250..253
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 280..282
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 280
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
FT BINDING 408..410
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q51548"
SQ SEQUENCE 444 AA; 50011 MW; 4A30C953E32582D6 CRC64;
MQRETVFDLI GVGFGPSNLA LAVRLAERSG AHTLAHCFVE RQPAFGWHRG MLLDDCRMQI
SFLKDLVTMR DPKSRYTFIN YLFERGRLNE FVNLKNFYPT RVEFHDYLSW VADAFDDRVH
YSETVLGIEP VRGDGARIDA LRVLSRDAAG HERQRVTRAL SVGVGGTPAI PDAFAALGRD
RVIHSSSYLT DIDRLVASPD GERRRVAVIG AGQSAAEVFI DLARRFPHVD ANLVMRAGAL
KPADDSPFVN EIFSPEFTDV VYAQPQDARR ALLERYRDTN YAVVDRPLIE QIYEMLYLQR
IDGTPRHALL ANSAIEAAVR TADGRIELTL RDRMSGATRI ERFDALVLAT GYRRDTHSAL
LEGLAPHLGD ALTRGDVTRD YLLATPEHFA PRIYLQGCCE DSHGRPTRCC RSWRAVRTKS
ARRSKTGSRP RTMKAWPGPR TKND