PSB28_SYNY3
ID PSB28_SYNY3 Reviewed; 112 AA.
AC Q55356;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Photosystem II reaction center Psb28 protein {ECO:0000255|HAMAP-Rule:MF_01370, ECO:0000303|PubMed:12069591};
DE AltName: Full=Photosystem II 13 kDa protein {ECO:0000255|HAMAP-Rule:MF_01370};
DE AltName: Full=Photosystem II reaction center W protein {ECO:0000255|HAMAP-Rule:MF_01370};
GN Name=psb28 {ECO:0000255|HAMAP-Rule:MF_01370, ECO:0000303|PubMed:12069591};
GN Synonyms=psbW {ECO:0000255|HAMAP-Rule:MF_01370}; OrderedLocusNames=sll1398;
OS Synechocystis sp. (strain PCC 6803 / Kazusa).
OC Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis;
OC unclassified Synechocystis.
OX NCBI_TaxID=1111708;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Ikeuchi M., Katoh H.;
RT "Cloning of genes for the 11 kDa and 13 kDa proteins of photosystem II from
RT Synechocystis sp. PCC 6803.";
RL Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 6803 / Kazusa;
RX PubMed=8905231; DOI=10.1093/dnares/3.3.109;
RA Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y.,
RA Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T.,
RA Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.,
RA Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence analysis of the genome of the unicellular cyanobacterium
RT Synechocystis sp. strain PCC6803. II. Sequence determination of the entire
RT genome and assignment of potential protein-coding regions.";
RL DNA Res. 3:109-136(1996).
RN [3]
RP PROTEIN SEQUENCE OF 2-20.
RX PubMed=9298645; DOI=10.1002/elps.1150180806;
RA Sazuka T., Ohara O.;
RT "Towards a proteome project of cyanobacterium Synechocystis sp. strain
RT PCC6803: linking 130 protein spots with their respective genes.";
RL Electrophoresis 18:1252-1258(1997).
RN [4]
RP PROTEIN SEQUENCE OF 2-12, GENE NAME, SUBUNIT, AND SUBCELLULAR LOCATION.
RC STRAIN=PCC 6803 / Kazusa;
RX PubMed=12069591; DOI=10.1021/bi026012+;
RA Kashino Y., Lauber W.M., Carroll J.A., Wang Q., Whitmarsh J., Satoh K.,
RA Pakrasi H.B.;
RT "Proteomic analysis of a highly active photosystem II preparation from the
RT cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel
RT polypeptides.";
RL Biochemistry 41:8004-8012(2002).
CC -!- SUBUNIT: Part of the photosystem II complex.
CC {ECO:0000269|PubMed:12069591}.
CC -!- SUBCELLULAR LOCATION: Cellular thylakoid membrane
CC {ECO:0000269|PubMed:12069591}; Peripheral membrane protein
CC {ECO:0000305|PubMed:12069591}; Cytoplasmic side
CC {ECO:0000305|PubMed:12069591}.
CC -!- SIMILARITY: Belongs to the Psb28 family. {ECO:0000255|HAMAP-
CC Rule:MF_01370}.
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DR EMBL; D82937; BAA11641.1; -; Genomic_DNA.
DR EMBL; BA000022; BAA16618.1; -; Genomic_DNA.
DR PIR; S74466; S74466.
DR PDB; 2KVO; NMR; -; A=1-112.
DR PDBsum; 2KVO; -.
DR AlphaFoldDB; Q55356; -.
DR BMRB; Q55356; -.
DR SMR; Q55356; -.
DR IntAct; Q55356; 6.
DR STRING; 1148.1651690; -.
DR PaxDb; Q55356; -.
DR EnsemblBacteria; BAA16618; BAA16618; BAA16618.
DR KEGG; syn:sll1398; -.
DR eggNOG; ENOG5031GDS; Bacteria.
DR InParanoid; Q55356; -.
DR OMA; EATYTWK; -.
DR PhylomeDB; Q55356; -.
DR BioCyc; MetaCyc:PSBW-MON; -.
DR EvolutionaryTrace; Q55356; -.
DR Proteomes; UP000001425; Chromosome.
DR GO; GO:0009654; C:photosystem II oxygen evolving complex; IEA:InterPro.
DR GO; GO:0031676; C:plasma membrane-derived thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030096; C:plasma membrane-derived thylakoid photosystem II; IDA:UniProtKB.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR Gene3D; 2.40.30.220; -; 1.
DR HAMAP; MF_01370; PSII_Psb28; 1.
DR InterPro; IPR038676; Psb28_c1_sf.
DR InterPro; IPR005610; PSII_Psb28_class-1.
DR PANTHER; PTHR34963; PTHR34963; 1.
DR Pfam; PF03912; Psb28; 1.
DR TIGRFAMs; TIGR03047; PS_II_psb28; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Membrane; Photosynthesis;
KW Photosystem II; Reference proteome; Thylakoid.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:12069591"
FT CHAIN 2..112
FT /note="Photosystem II reaction center Psb28 protein"
FT /id="PRO_0000217286"
FT STRAND 3..9
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 17..22
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 28..37
FT /evidence="ECO:0007829|PDB:2KVO"
FT HELIX 39..41
FT /evidence="ECO:0007829|PDB:2KVO"
FT HELIX 46..48
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 52..55
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 60..63
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 66..71
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 74..84
FT /evidence="ECO:0007829|PDB:2KVO"
FT HELIX 88..103
FT /evidence="ECO:0007829|PDB:2KVO"
FT STRAND 106..108
FT /evidence="ECO:0007829|PDB:2KVO"
SQ SEQUENCE 112 AA; 12590 MW; B6DEB024B466B220 CRC64;
MAEIQFSKGV AETVVPEVRL SKSKNGQSGM AKFYFLEPTI LAKESTDDIT GMYLIDDEGE
IITREVKGKF INGRPTAIEA TVILNSQPEW DRFMRFMERY GAENGLGFSK SE