PHLB_ARATH
ID PHLB_ARATH Reviewed; 280 AA.
AC C0SVS4; F4KEK2; Q9FH42;
DT 06-JUL-2016, integrated into UniProtKB/Swiss-Prot.
DT 26-MAY-2009, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Myb family transcription factor PHL11 {ECO:0000305};
DE AltName: Full=Protein PHR1-LIKE 11 {ECO:0000305};
GN Name=PHL11 {ECO:0000305};
GN OrderedLocusNames=At5g45580 {ECO:0000312|Araport:AT5G45580};
GN ORFNames=K2N11.5 {ECO:0000312|EMBL:BAB11197.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:BAH30615.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=11511543; DOI=10.1101/gad.204401;
RA Rubio V., Linhares F., Solano R., Martin A.C., Iglesias J., Leyva A.,
RA Paz-Ares J.;
RT "A conserved MYB transcription factor involved in phosphate starvation
RT signaling both in vascular plants and in unicellular algae.";
RL Genes Dev. 15:2122-2133(2001).
CC -!- INTERACTION:
CC C0SVS4; Q9FL03: SCL4; NbExp=4; IntAct=EBI-15194203, EBI-1238466;
CC C0SVS4; Q9SCR0: SCL7; NbExp=3; IntAct=EBI-15194203, EBI-15193551;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625}.
CC -!- SIMILARITY: Belongs to the MYB-CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AED95271.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAB11197.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB022213; BAB11197.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED95271.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; ANM68717.1; -; Genomic_DNA.
DR EMBL; AB493777; BAH30615.1; -; mRNA.
DR RefSeq; NP_001330443.1; NM_001344633.1.
DR RefSeq; NP_199371.2; NM_123926.3.
DR AlphaFoldDB; C0SVS4; -.
DR SMR; C0SVS4; -.
DR IntAct; C0SVS4; 10.
DR STRING; 3702.AT5G45580.1; -.
DR iPTMnet; C0SVS4; -.
DR PRIDE; C0SVS4; -.
DR DNASU; 834596; -.
DR EnsemblPlants; AT5G45580.2; AT5G45580.2; AT5G45580.
DR GeneID; 834596; -.
DR Gramene; AT5G45580.2; AT5G45580.2; AT5G45580.
DR KEGG; ath:AT5G45580; -.
DR Araport; AT5G45580; -.
DR TAIR; locus:2157146; AT5G45580.
DR eggNOG; ENOG502RIH2; Eukaryota.
DR OMA; FEPRCFR; -.
DR OrthoDB; 1100296at2759; -.
DR PhylomeDB; C0SVS4; -.
DR PRO; PR:C0SVS4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; C0SVS4; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:2000762; P:regulation of phenylpropanoid metabolic process; IMP:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR025756; Myb_CC_LHEQLE.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR006447; Myb_dom_plants.
DR InterPro; IPR044848; PHR1-like.
DR PANTHER; PTHR31499; PTHR31499; 1.
DR Pfam; PF14379; Myb_CC_LHEQLE; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR TIGRFAMs; TIGR01557; myb_SHAQKYF; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
PE 1: Evidence at protein level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..280
FT /note="Myb family transcription factor PHL11"
FT /id="PRO_0000436868"
FT DOMAIN 20..80
FT /note="HTH myb-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00625"
FT DNA_BIND 51..76
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00625"
FT REGION 77..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 129..149
FT /note="Coiled coil"
FT /evidence="ECO:0000305"
FT MOTIF 142..147
FT /note="LHEQLE"
FT /evidence="ECO:0000305"
SQ SEQUENCE 280 AA; 31105 MW; DA3FBBFE1AEBC1C2 CRC64;
MERVNLGGLG YDNGGVMMTR DPKPRLRWTA DLHDRFVDAV AKLGGADKAT PKSVLKLMGL
KGLTLYHLKS HLQKYRLGQQ QGKKQNRTEQ NKENAGSSYV HFDNCSQGGI SNDSRFDNHQ
RQSGNVPFAE AMRHQVDAQQ RFQEQLEVQK KLQMRMEAQG KYLLTLLEKA QKSLPCGNAG
ETDKGQFSDF NLALSGLVGS DRKNEKAGLV TDISHLNGGD SSQEFRLCGE QEKIETGDAC
VKPESGFVHF DLNSKSGYDL LNCGKYGIEV KPNVIGDRLQ
