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PESC_CAEBR
ID   PESC_CAEBR              Reviewed;         532 AA.
AC   A8X871;
DT   05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   15-JAN-2008, sequence version 1.
DT   03-AUG-2022, entry version 72.
DE   RecName: Full=Pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028};
DE   AltName: Full=Lipid depleted protein 7 {ECO:0000255|HAMAP-Rule:MF_03028};
GN   Name=lpd-7 {ECO:0000255|HAMAP-Rule:MF_03028}; ORFNames=CBG09152;
OS   Caenorhabditis briggsae.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6238;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AF16;
RX   PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA   Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA   Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA   Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA   Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA   Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA   Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA   Durbin R.M., Waterston R.H.;
RT   "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT   genomics.";
RL   PLoS Biol. 1:166-192(2003).
CC   -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC       the large ribosomal subunit. {ECO:0000255|HAMAP-Rule:MF_03028}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC       Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03028}.
CC   -!- SIMILARITY: Belongs to the pescadillo family. {ECO:0000255|HAMAP-
CC       Rule:MF_03028}.
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DR   EMBL; HE601302; CAP28832.1; -; Genomic_DNA.
DR   RefSeq; XP_002642598.1; XM_002642552.1.
DR   AlphaFoldDB; A8X871; -.
DR   SMR; A8X871; -.
DR   STRING; 6238.CBG09152; -.
DR   EnsemblMetazoa; CBG09152.1; CBG09152.1; WBGene00030799.
DR   GeneID; 8584592; -.
DR   KEGG; cbr:CBG_09152; -.
DR   CTD; 8584592; -.
DR   WormBase; CBG09152; CBP08183; WBGene00030799; Cbr-lpd-7.
DR   eggNOG; KOG2481; Eukaryota.
DR   HOGENOM; CLU_019619_0_0_1; -.
DR   InParanoid; A8X871; -.
DR   OMA; TWIVPHY; -.
DR   OrthoDB; 777920at2759; -.
DR   Proteomes; UP000008549; Chromosome III.
DR   GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0070545; C:PeBoW complex; IBA:GO_Central.
DR   GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR   GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0019915; P:lipid storage; IEA:EnsemblMetazoa.
DR   GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR   GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR   Gene3D; 3.40.50.10190; -; 1.
DR   HAMAP; MF_03028; Pescadillo; 1.
DR   InterPro; IPR001357; BRCT_dom.
DR   InterPro; IPR036420; BRCT_dom_sf.
DR   InterPro; IPR010613; PES.
DR   PANTHER; PTHR12221; PTHR12221; 1.
DR   Pfam; PF16589; BRCT_2; 1.
DR   Pfam; PF06732; Pescadillo_N; 1.
DR   SMART; SM00292; BRCT; 1.
DR   SUPFAM; SSF52113; SSF52113; 1.
DR   PROSITE; PS50172; BRCT; 1.
PE   3: Inferred from homology;
KW   Nucleus; Reference proteome; Ribosome biogenesis; rRNA processing.
FT   CHAIN           1..532
FT                   /note="Pescadillo homolog"
FT                   /id="PRO_0000370465"
FT   DOMAIN          309..398
FT                   /note="BRCT"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03028"
SQ   SEQUENCE   532 AA;  61747 MW;  4A21B98259232A96 CRC64;
     MKDRFKQKYT AGAAVAYMSR KQALKKLQLT LKDFRRLCII KGIYPHEPAH KKQANKGSTA
     NKVFYYRKDI NFLAHEPIIN KFRDYKVFLR KLNHLKAKKE DEKIKKLYDN KPVYNLDTIV
     KERFPTFGSA LRDMDDALSL CFTFAMLPHT RVLKEGMIDS CRKLTAEFMH YVIESQSLRN
     TFISIKGIYY QAEVHGEKIT WVVPHERGLP HVTDVDFTVL VTFVEFYIAM LGFVNFKLYQ
     DIGLFYPPQI GQVVEGDEME SEEYKEKVYS LAKPLAKRKD VEQTEDDEPL DLLGEDSDAL
     AQKVKEAKNI KTLFKGCVFY LNRECPKEAL TFIIRNGGGV VGWEGAPNDL KADSKNITHH
     IVDRPMDKLE VNRLYVQPQW VFDCLNARRK LPTERYMPGV ALPPHFSPFT SEKAGDYIPF
     ERLEELRSMG KDVSELEAAI PKTMDELPMR RKEVKPEKPK GIHIAVGQMH KKSKEKFHET
     VEKGQELKMR ELMISKKHQR VYHSMKTTFK RNRNDALKLK KKAKLVKATA EA
 
 
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