PESC_CAEBR
ID PESC_CAEBR Reviewed; 532 AA.
AC A8X871;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=Pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028};
DE AltName: Full=Lipid depleted protein 7 {ECO:0000255|HAMAP-Rule:MF_03028};
GN Name=lpd-7 {ECO:0000255|HAMAP-Rule:MF_03028}; ORFNames=CBG09152;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SIMILARITY: Belongs to the pescadillo family. {ECO:0000255|HAMAP-
CC Rule:MF_03028}.
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DR EMBL; HE601302; CAP28832.1; -; Genomic_DNA.
DR RefSeq; XP_002642598.1; XM_002642552.1.
DR AlphaFoldDB; A8X871; -.
DR SMR; A8X871; -.
DR STRING; 6238.CBG09152; -.
DR EnsemblMetazoa; CBG09152.1; CBG09152.1; WBGene00030799.
DR GeneID; 8584592; -.
DR KEGG; cbr:CBG_09152; -.
DR CTD; 8584592; -.
DR WormBase; CBG09152; CBP08183; WBGene00030799; Cbr-lpd-7.
DR eggNOG; KOG2481; Eukaryota.
DR HOGENOM; CLU_019619_0_0_1; -.
DR InParanoid; A8X871; -.
DR OMA; TWIVPHY; -.
DR OrthoDB; 777920at2759; -.
DR Proteomes; UP000008549; Chromosome III.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0070545; C:PeBoW complex; IBA:GO_Central.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019915; P:lipid storage; IEA:EnsemblMetazoa.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR Gene3D; 3.40.50.10190; -; 1.
DR HAMAP; MF_03028; Pescadillo; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR010613; PES.
DR PANTHER; PTHR12221; PTHR12221; 1.
DR Pfam; PF16589; BRCT_2; 1.
DR Pfam; PF06732; Pescadillo_N; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; SSF52113; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Ribosome biogenesis; rRNA processing.
FT CHAIN 1..532
FT /note="Pescadillo homolog"
FT /id="PRO_0000370465"
FT DOMAIN 309..398
FT /note="BRCT"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03028"
SQ SEQUENCE 532 AA; 61747 MW; 4A21B98259232A96 CRC64;
MKDRFKQKYT AGAAVAYMSR KQALKKLQLT LKDFRRLCII KGIYPHEPAH KKQANKGSTA
NKVFYYRKDI NFLAHEPIIN KFRDYKVFLR KLNHLKAKKE DEKIKKLYDN KPVYNLDTIV
KERFPTFGSA LRDMDDALSL CFTFAMLPHT RVLKEGMIDS CRKLTAEFMH YVIESQSLRN
TFISIKGIYY QAEVHGEKIT WVVPHERGLP HVTDVDFTVL VTFVEFYIAM LGFVNFKLYQ
DIGLFYPPQI GQVVEGDEME SEEYKEKVYS LAKPLAKRKD VEQTEDDEPL DLLGEDSDAL
AQKVKEAKNI KTLFKGCVFY LNRECPKEAL TFIIRNGGGV VGWEGAPNDL KADSKNITHH
IVDRPMDKLE VNRLYVQPQW VFDCLNARRK LPTERYMPGV ALPPHFSPFT SEKAGDYIPF
ERLEELRSMG KDVSELEAAI PKTMDELPMR RKEVKPEKPK GIHIAVGQMH KKSKEKFHET
VEKGQELKMR ELMISKKHQR VYHSMKTTFK RNRNDALKLK KKAKLVKATA EA