NCAP_PI4HA
ID NCAP_PI4HA Reviewed; 551 AA.
AC P17240;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 02-JUN-2021, entry version 75.
DE RecName: Full=Nucleoprotein;
DE AltName: Full=Nucleocapsid protein;
DE Short=NP;
DE Short=Protein N;
GN Name=N; Synonyms=NP;
OS Human parainfluenza 4a virus (strain Toshiba) (HPIV-4a).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae;
OC Orthorubulavirus; Human orthorubulavirus 4.
OX NCBI_TaxID=11225;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=2152988; DOI=10.1016/0042-6822(90)90047-u;
RA Kondo K., Bando H., Kawano M., Tsurudome M., Komada H., Nishio M., Ito Y.;
RT "Sequencing analyses and comparison of parainfluenza virus type 4A and 4B
RT NP protein genes.";
RL Virology 174:1-8(1990).
CC -!- FUNCTION: Encapsidates the genome, protecting it from nucleases. The
CC nucleocapsid (NC) has a helical structure. The encapsidated genomic RNA
CC is termed the NC and serves as template for transcription and
CC replication. During replication, encapsidation by N is coupled to RNA
CC synthesis and all replicative products are resistant to nucleases (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA. In nucleocapsid, binds the P protein and thereby positions
CC the polymerase on the template (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host cytoplasm.
CC -!- DOMAIN: Ncore is globular and carries regions required for N self-
CC assembly and RNA-binding. Ntail is an intrinsically disordered
CC monomeric domain (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the paramyxoviruses nucleocapsid family.
CC {ECO:0000305}.
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DR EMBL; M32982; AAA46801.1; -; mRNA.
DR PIR; A33772; VHNZ4A.
DR RefSeq; YP_008378659.1; NC_021928.1.
DR SMR; P17240; -.
DR DNASU; 16488737; -.
DR GeneID; 16488737; -.
DR KEGG; vg:16488737; -.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR002021; Paramyx_ncap.
DR Pfam; PF00973; Paramyxo_ncap; 1.
PE 2: Evidence at transcript level;
KW Capsid protein; Helical capsid protein; Host cytoplasm; Ribonucleoprotein;
KW RNA-binding; Viral nucleoprotein; Virion.
FT CHAIN 1..551
FT /note="Nucleoprotein"
FT /id="PRO_0000142668"
FT REGION 1..400
FT /note="Ncore"
FT /evidence="ECO:0000250"
FT REGION 401..551
FT /note="Ntail"
FT /evidence="ECO:0000250"
FT REGION 508..551
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 521..543
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 551 AA; 62562 MW; F437918A0FF96538 CRC64;
MSSVLAAYEQ FLQTTEDRGF GDQQFVQSDT LKAEIPVFVL NTNDPQQRFT LMNFCLRQAV
SSSAKSAIKQ GALLSLLSLQ ATSMQNHLMI AARAPDAALR IIEVDAIDPP DYTLTINPRS
GWDDIKIRAY RALSRDLPIS LADRTVFVSR DAEHAVCDDM DTYLNRIFSV LIQVWIMVCK
CMTAYDQPTG SEERRLAKYK QQGRMLERYQ LQTDARKIIQ LVIRESMVIR QFLVQEMLTA
DKVGAYTNRY YAMVGDIAKY IANVGMSAFF LTLKFGLGNR WKPLALAAFS GELVKLKSLM
SLYRRLGDRS RYLALLESPE LMEFAPANYP LLFSYAMGVG SVQDPLIRNY QFGRNFLNTS
YFQYGVETAM KHQGTVDPKF ASELGITDED RVDIMQSVEK HISGKAGDDI SQPRSAFTMS
LNRSAFITNN NPQDLSGARL SNYEQGWSGI DQDETRDTLP ESTMHRFQNI DSTNSDHNEL
QMPEFENDIN PFNHPRFTAR APLIPEISHQ TPTIRMNRNV NIRDSTRDDR QDANEDRSSN
IPDDILGDLD N