MEF2D_XENLA
ID MEF2D_XENLA Reviewed; 498 AA.
AC Q03413;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Myocyte-specific enhancer factor 2D homolog;
DE AltName: Full=Serum response factor-like protein 1;
DE Short=SL-1;
GN Name=mef2d; Synonyms=sl1;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Neurula;
RX PubMed=1281451; DOI=10.1002/j.1460-2075.1992.tb05605.x;
RA Chambers A.E., Kotecha S., Towers N., Mohun T.J.;
RT "Muscle-specific expression of SRF-related genes in the early embryo of
RT Xenopus laevis.";
RL EMBO J. 11:4981-4991(1992).
RN [2]
RP INTERACTION WITH HDAC9.
RX PubMed=10487760; DOI=10.1093/emboj/18.18.5085;
RA Sparrow D.B., Miska E.A., Langley E., Reynaud-Deonauth S., Kotecha S.,
RA Towers N., Spohr G., Kouzarides T., Mohun T.J.;
RT "MEF-2 function is modified by a novel co-repressor, MITR.";
RL EMBO J. 18:5085-5098(1999).
CC -!- FUNCTION: May regulate muscle-specific transcription in the embryo and
CC may regulate transcription of a variety of cell types in the adult. It
CC binds to the sequence 5'-CTA[TA]4TAR-3'.
CC -!- SUBUNIT: Binds DNA as a multimer, probably as a dimer. Interacts with
CC hdac9. {ECO:0000269|PubMed:10487760}.
CC -!- SUBCELLULAR LOCATION: Nucleus.
CC -!- TISSUE SPECIFICITY: Restricted to the somitic mesoderm of early embryos
CC and to the body muscle (myotomes) of the tadpole. Expressed in all
CC tissues examined in the adult.
CC -!- DEVELOPMENTAL STAGE: Expression begins in the late gastrula.
CC -!- SIMILARITY: Belongs to the MEF2 family. {ECO:0000305}.
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DR EMBL; Z19124; CAA79531.1; -; mRNA.
DR PIR; S28059; S28059.
DR RefSeq; NP_001095265.1; NM_001101795.1.
DR AlphaFoldDB; Q03413; -.
DR SMR; Q03413; -.
DR BioGRID; 100665; 1.
DR GeneID; 399340; -.
DR KEGG; xla:399340; -.
DR CTD; 399340; -.
DR Xenbase; XB-GENE-6254040; mef2d.S.
DR Proteomes; UP000186698; Chromosome 8S.
DR Bgee; 399340; Expressed in muscle tissue and 19 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR022102; HJURP_C.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF12347; HJURP_C; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 1: Evidence at protein level;
KW Activator; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..498
FT /note="Myocyte-specific enhancer factor 2D homolog"
FT /id="PRO_0000199437"
FT DOMAIN 3..57
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT DNA_BIND 58..86
FT /note="Mef2-type"
FT /evidence="ECO:0000255"
FT REGION 1..100
FT /note="Interaction with hdac9"
FT REGION 173..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 243..267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 411..498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..196
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 421..457
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 498 AA; 54071 MW; 9E98D13D80AAF510 CRC64;
MGRKKIQIQR ITDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNH SNKLFQYAST
DMDKVLLKYT EYNEPHESRT NADIIETLRK KGFNGCDSPE PDGDDSIDQS PLMEDKYRKS
SEDLDILFKR YGSAVPAPNF AMPVTVPVTN QNALHFSNPG GSLITQSLMT SSLTDPRLLS
PPQPSLQRNT VSPGLPQRPA SAGAMLGGEL NNSNGTCPSP VGNGYISARA SPGLLPVSNG
NSLGKVIQAK SPPSPNQNSQ LGANSRKPDL RVITSQGGKG LMHHLTEEQL EMSVQRLGGV
SQATHSLTTP VVSVATPSLL SHHGLPFSAM STAYNTDYQL TSADLASLST FSSPGSLSLG
NVTAWQHQQQ QQQQHNQPQQ LIPVSLSNLV SSSHLPHTAT LTVNTNPINI SIKREPASPN
RERSTGTPLS CFSHQSRHEA TGRSPVDSLS SNASSFEGND REDPRGDYTS SLGLLRPSGD
TESESQSVKR MRLDAWVT