MCAPS_PEMVW
ID MCAPS_PEMVW Reviewed; 493 AA.
AC Q84711;
DT 19-JAN-2010, integrated into UniProtKB/Swiss-Prot.
DT 19-JAN-2010, sequence version 2.
DT 23-FEB-2022, entry version 54.
DE RecName: Full=Minor capsid protein P3-RTD;
DE AltName: Full=Readthrough protein;
DE Short=RT protein;
GN ORFNames=ORF3/ORF5;
OS Pea enation mosaic virus-1 (strain WSG) (PEMV-1).
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Sobelivirales; Solemoviridae; Enamovirus.
OX NCBI_TaxID=693989;
OH NCBI_TaxID=3827; Cicer arietinum (Chickpea) (Garbanzo).
OH NCBI_TaxID=3859; Lathyrus odoratus (Sweet pea).
OH NCBI_TaxID=3864; Lens culinaris (Lentil) (Cicer lens).
OH NCBI_TaxID=70936; Medicago arabica.
OH NCBI_TaxID=3888; Pisum sativum (Garden pea).
OH NCBI_TaxID=60916; Trifolium incarnatum (Crimson clover).
OH NCBI_TaxID=3906; Vicia faba (Broad bean) (Faba vulgaris).
OH NCBI_TaxID=3908; Vicia sativa (Spring vetch) (Tare).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=1875194; DOI=10.1099/0022-1317-72-8-1819;
RA Demler S.A., de Zoeten G.A.;
RT "The nucleotide sequence and luteovirus-like nature of RNA 1 of an aphid
RT non-transmissible strain of pea enation mosaic virus.";
RL J. Gen. Virol. 72:1819-1834(1991).
RN [2]
RP FUNCTION OF READTHROUGH DOMAIN.
RX PubMed=19240978; DOI=10.1007/s00705-009-0327-7;
RA Liu S., Sivakumar S., Wang Z., Bonning B.C., Miller W.A.;
RT "The readthrough domain of pea enation mosaic virus coat protein is not
RT essential for virus stability in the hemolymph of the pea aphid.";
RL Arch. Virol. 154:469-479(2009).
CC -!- FUNCTION: Minor component of the viral capsid involved in aphid
CC transmission. The RTD domain of the protein is exposed on the surface
CC of the particle and determines the vector specificity and tropism of
CC the virus (By similarity). The RTD domain is not necessary for virus
CC stability in the host hemolymph. {ECO:0000250,
CC ECO:0000269|PubMed:19240978}.
CC -!- SUBCELLULAR LOCATION: [Minor capsid protein P3-RTD]: Virion
CC {ECO:0000305}.
CC -!- MISCELLANEOUS: This protein is translated as a fusion protein by
CC episodic readthrough of the major coat protein termination codon. It is
CC composed of the major capsid protein fused to a long C-terminal
CC extension called the readthrough domain (RTD). Readthrough of the
CC terminator codon TGA occurs between the codons for 189-Leu and 191-Gly.
CC -!- MISCELLANEOUS: The N-terminal region like those of many plant virus
CC capsid proteins is highly basic. It has been suggested that these
CC regions may be involved in protein-RNA interaction.
CC -!- SIMILARITY: Belongs to the luteoviruses readthrough protein family.
CC {ECO:0000305}.
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DR EMBL; L04573; AAA72298.1; -; Genomic_RNA.
DR PIR; JQ1386; JQ1386.
DR SMR; Q84711; -.
DR Proteomes; UP000000519; Genome.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR001517; Luteo_coat.
DR InterPro; IPR002929; PLrV_ORF5.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00894; Luteo_coat; 1.
DR Pfam; PF01690; PLRV_ORF5; 1.
PE 3: Inferred from homology;
KW Capsid protein; Reference proteome; Virion.
FT CHAIN 1..493
FT /note="Minor capsid protein P3-RTD"
FT /id="PRO_0000390918"
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 189..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 191..493
FT /note="Readthrough domain (RTD)"
FT REGION 445..493
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..217
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT UNSURE 190
SQ SEQUENCE 493 AA; 54745 MW; EAE9DE3E614BBE5D CRC64;
MPTRSRSKAN QRRRRPRRVV VVAPSMAQPR TQSRRPRRRN KRGGGLNGSH TVDFSMVHGP
FNGNATGTVK FGPSSDCQCI KGNLAAYQKY RIVWLKVVYQ SEAAATDRGC IAYHVDTSTT
KKAADVVLLD TWNIRSNGSA TFGREILGDQ PWYESNKDQF FFLYRGTGGT DVAGHYRISG
RIQLMNASLW GDDAPPSPGP DPGPQPPPPP PPSPTPVGAR FWGYEGVPES RMISERNDHD
IDVKPLSFIT MYKWEDESWT SVKLSASYLQ NDQVEATPYF LIPSSKGKFS VYIECEGFQA
VKSIGGKSDG CWGGLIAYNR KKDGWQARAY TGTVLSNYRS TTTVINGHPD CEVNDCKFKP
DRGVESDLIC SFHLEAEEDS YWALQAPPIQ KSSDYNYVVS YGGYTEKSIE WGSVSISIDE
VNQTASASPW RGRARKLAIL QETAVPPPFP PGGVMDYHLG DREGDQTGTS EKGLLKKPPL
PKWDLQRSRS PLD