ID   LPTD_XANOR              Reviewed;         813 AA.
AC   Q5GWC2;
DT   07-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   07-JUN-2005, sequence version 2.
DT   25-MAY-2022, entry version 89.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=XOO3745;
OS   Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xanthomonas.
OX   NCBI_TaxID=291331;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KACC10331 / KXO85;
RX   PubMed=15673718; DOI=10.1093/nar/gki206;
RA   Lee B.-M., Park Y.-J., Park D.-S., Kang H.-W., Kim J.-G., Song E.-S.,
RA   Park I.-C., Yoon U.-H., Hahn J.-H., Koo B.-S., Lee G.-B., Kim H.,
RA   Park H.-S., Yoon K.-O., Kim J.-H., Jung C.-H., Koh N.-H., Seo J.-S.,
RA   Go S.-J.;
RT   "The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the
RT   bacterial blight pathogen of rice.";
RL   Nucleic Acids Res. 33:577-586(2005).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAW76999.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AE013598; AAW76999.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; WP_012444236.1; NC_006834.1.
DR   AlphaFoldDB; Q5GWC2; -.
DR   SMR; Q5GWC2; -.
DR   STRING; 291331.XOO3745; -.
DR   EnsemblBacteria; AAW76999; AAW76999; XOO3745.
DR   KEGG; xoo:XOO3745; -.
DR   HOGENOM; CLU_009039_0_0_6; -.
DR   Proteomes; UP000006735; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR045659; LptD_2.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF19838; LptD_2; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Reference proteome; Signal.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           23..813
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000020298"
SQ   SEQUENCE   813 AA;  92478 MW;  FADE031B0006196A CRC64;
     MRRALRLLPL PLSIAICLPA MAADKPFNWG LCPTVDPLPG FDGAPAADPK AAEMRQQLPT
     DIEGDQLSGT STTPQYQGNV ALKRGDQFLG ADNLRMDTET GNYIAEGNVR YQDTSFRMVA
     DRAEGNQDTD THKVTNIRYQ LVERRGNGDA ESVDLQGQVG QMHRSTYTTC DPSQPIWRVR
     APEIDVDNGE GFGTARNAVL QIGNVPVLYF PWFKFPIDDR RQTGLLFPQF GLSRRNGFDY
     LQPIYLNLAP NYDATLLPRY MSKRGFMFGT EFRYLYEGGR GEVTGNYLPN DKLRDKDRGS
     VFYSGYHNVN SNWQARSSIS WVSDTRYVED FTSRLNGMGS ASSLQSTVGI YGTGETWTAG
     LMAERWQLTD YTLDERSLPY NRQPRAYFNW EKPFGIFEAG VYAEAVRFTH DDSYFVQPPS
     PSVPGEANNR DNNDKYVRTN IRNQEYGSGS RLDLKPYVSM PLSGAAWFFT PTLAWRYTAY
     QLDSTLAKTG PLTGDRSPSR SLPIASVDAG LYFDRETSLL GTNYLNTLEP RMYYLYVPYR
     DQDDLPVFDT RPFTFSYGQL FRDTRYTGAD RQNDANQLTL AVTSRWLRQD DGREKLSLSA
     GQILYFSDSR VTINNSTNAV AGSEQTIDQG KSAWVVDANY MINDRWSMGA TYQWNPNSRK
     EDLASLRTRY LLDNDGIINL AYRYRRNLID NSDQLKQADF SFLYPINPSW SAVGRYYYSL
     QDRKPLEIIG GVQWDSCCLA VRGLVRRFVR NRDGQMDNSI QIEFVLKGLS SFGQNTDRTL
     RRAILGYYRD DLYLVPPSNT TTNPDDYDPN LIP