KAIB_THEVB
ID KAIB_THEVB Reviewed; 108 AA.
AC Q79V61; Q8RR34;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Circadian clock protein KaiB {ECO:0000255|HAMAP-Rule:MF_01835};
GN Name=kaiB {ECO:0000255|HAMAP-Rule:MF_01835}; OrderedLocusNames=tlr0482;
OS Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1).
OC Bacteria; Cyanobacteria; Pseudanabaenales; Thermosynechococcaceae;
OC Thermosynechococcus.
OX NCBI_TaxID=197221;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=12622725; DOI=10.1046/j.1365-2443.2003.00633.x;
RA Hayashi F., Suzuki H., Iwase R., Uzumaki T., Miyake A., Shen J.-R.,
RA Imada K., Furukawa Y., Yonekura K., Namba K., Ishiura M.;
RT "ATP-induced hexameric ring structure of the cyanobacterial circadian clock
RT protein KaiC.";
RL Genes Cells 8:287-296(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-2133 / IAM M-273 / BP-1;
RX PubMed=12240834; DOI=10.1093/dnares/9.4.123;
RA Nakamura Y., Kaneko T., Sato S., Ikeuchi M., Katoh H., Sasamoto S.,
RA Watanabe A., Iriguchi M., Kawashima K., Kimura T., Kishida Y., Kiyokawa C.,
RA Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Sugimoto M.,
RA Takeuchi C., Yamada M., Tabata S.;
RT "Complete genome structure of the thermophilic cyanobacterium
RT Thermosynechococcus elongatus BP-1.";
RL DNA Res. 9:123-130(2002).
CC -!- FUNCTION: Component of the KaiABC clock protein complex, which
CC constitutes the main circadian regulator in cyanobacteria. The KaiABC
CC complex may act as a promoter-non-specific transcription regulator that
CC represses transcription, possibly by acting on the state of chromosome
CC compaction. In the complex, it decreases the phosphorylation status of
CC KaiC. It has no effect on KaiC by itself, but instead needs the
CC presence of both KaiA and KaiC, suggesting that it acts by antagonizing
CC the interaction between KaiA and KaiC. {ECO:0000255|HAMAP-
CC Rule:MF_01835}.
CC -!- SUBUNIT: Homodimer. Component of the KaiABC complex, at least composed
CC of a KaiC homohexamer, a KaiB dimer and two KaiA dimers. The KaiABC
CC complex also interacts with SasA. {ECO:0000255|HAMAP-Rule:MF_01835}.
CC -!- INTERACTION:
CC Q79V61; Q79V60: kaiC; NbExp=6; IntAct=EBI-7570699, EBI-701595;
CC -!- SIMILARITY: Belongs to the KaiB family. {ECO:0000255|HAMAP-
CC Rule:MF_01835}.
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DR EMBL; AB071375; BAB85984.1; -; Genomic_DNA.
DR EMBL; BA000039; BAC08034.1; -; Genomic_DNA.
DR RefSeq; NP_681272.1; NC_004113.1.
DR RefSeq; WP_011056333.1; NC_004113.1.
DR PDB; 1VGL; X-ray; 2.60 A; A/B/C/D=1-108.
DR PDB; 2QKE; X-ray; 2.70 A; A/B/C/D/E/F=1-108.
DR PDB; 5JWO; X-ray; 1.80 A; B=1-99.
DR PDB; 5JWQ; X-ray; 3.87 A; B/D=1-99.
DR PDB; 5JWR; X-ray; 2.61 A; B/D=1-99.
DR PDB; 5JYT; NMR; -; A=1-99.
DR PDB; 5JYV; NMR; -; B=1-99.
DR PDBsum; 1VGL; -.
DR PDBsum; 2QKE; -.
DR PDBsum; 5JWO; -.
DR PDBsum; 5JWQ; -.
DR PDBsum; 5JWR; -.
DR PDBsum; 5JYT; -.
DR PDBsum; 5JYV; -.
DR AlphaFoldDB; Q79V61; -.
DR SMR; Q79V61; -.
DR DIP; DIP-29356N; -.
DR IntAct; Q79V61; 1.
DR MINT; Q79V61; -.
DR STRING; 197221.22294203; -.
DR EnsemblBacteria; BAC08034; BAC08034; BAC08034.
DR KEGG; tel:tlr0482; -.
DR PATRIC; fig|197221.4.peg.507; -.
DR eggNOG; COG4251; Bacteria.
DR OMA; NEFKGVY; -.
DR OrthoDB; 1999883at2; -.
DR EvolutionaryTrace; Q79V61; -.
DR Proteomes; UP000000440; Chromosome.
DR GO; GO:0007623; P:circadian rhythm; IEA:UniProtKB-UniRule.
DR GO; GO:0042326; P:negative regulation of phosphorylation; IEA:InterPro.
DR CDD; cd02978; KaiB_like; 1.
DR HAMAP; MF_01835; KaiB; 1.
DR InterPro; IPR013474; Circ_KaiB.
DR InterPro; IPR039022; KaiB-like.
DR InterPro; IPR011649; KaiB_domain.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR PANTHER; PTHR41709; PTHR41709; 1.
DR Pfam; PF07689; KaiB; 1.
DR SMART; SM01248; KaiB; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
DR TIGRFAMs; TIGR02654; circ_KaiB; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Biological rhythms; Reference proteome.
FT CHAIN 1..108
FT /note="Circadian clock protein KaiB"
FT /id="PRO_0000217765"
FT STRAND 8..14
FT /evidence="ECO:0007829|PDB:5JWO"
FT HELIX 19..33
FT /evidence="ECO:0007829|PDB:5JWO"
FT TURN 34..39
FT /evidence="ECO:0007829|PDB:5JWO"
FT STRAND 40..46
FT /evidence="ECO:0007829|PDB:5JWO"
FT TURN 47..49
FT /evidence="ECO:0007829|PDB:5JWO"
FT HELIX 51..57
FT /evidence="ECO:0007829|PDB:5JWO"
FT STRAND 58..60
FT /evidence="ECO:0007829|PDB:1VGL"
FT STRAND 61..72
FT /evidence="ECO:0007829|PDB:5JWO"
FT STRAND 74..78
FT /evidence="ECO:0007829|PDB:5JWO"
FT HELIX 83..93
FT /evidence="ECO:0007829|PDB:5JWO"
SQ SEQUENCE 108 AA; 12025 MW; BC6B71EFBE6254E3 CRC64;
MAPLRKTYVL KLYVAGNTPN SVRALKTLNN ILEKEFKGVY ALKVIDVLKN PQLAEEDKIL
ATPTLAKVLP PPVRRIIGDL SNREKVLIGL DLLYEEIGDQ AEDDLGLE