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KAIB_SYNS3
ID   KAIB_SYNS3              Reviewed;         119 AA.
AC   Q0I803;
DT   05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   03-OCT-2006, sequence version 1.
DT   25-MAY-2022, entry version 85.
DE   RecName: Full=Circadian clock protein KaiB {ECO:0000255|HAMAP-Rule:MF_01835};
GN   Name=kaiB {ECO:0000255|HAMAP-Rule:MF_01835}; OrderedLocusNames=sync_2221;
OS   Synechococcus sp. (strain CC9311).
OC   Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC   unclassified Synechococcus.
OX   NCBI_TaxID=64471;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CC9311;
RX   PubMed=16938853; DOI=10.1073/pnas.0602963103;
RA   Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H.,
RA   Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S.,
RA   Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R.,
RA   Paulsen I.T.;
RT   "Genome sequence of Synechococcus CC9311: insights into adaptation to a
RT   coastal environment.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006).
CC   -!- FUNCTION: Component of the KaiABC clock protein complex, which
CC       constitutes the main circadian regulator in cyanobacteria. The KaiABC
CC       complex may act as a promoter-non-specific transcription regulator that
CC       represses transcription, possibly by acting on the state of chromosome
CC       compaction. In the complex, it decreases the phosphorylation status of
CC       KaiC. It has no effect on KaiC by itself, but instead needs the
CC       presence of both KaiA and KaiC, suggesting that it acts by antagonizing
CC       the interaction between KaiA and KaiC. {ECO:0000255|HAMAP-
CC       Rule:MF_01835}.
CC   -!- SUBUNIT: Homodimer. Component of the KaiABC complex, at least composed
CC       of a KaiC homohexamer, a KaiB dimer and two KaiA dimers. The KaiABC
CC       complex also interacts with SasA. {ECO:0000255|HAMAP-Rule:MF_01835}.
CC   -!- SIMILARITY: Belongs to the KaiB family. {ECO:0000255|HAMAP-
CC       Rule:MF_01835}.
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DR   EMBL; CP000435; ABI47337.1; -; Genomic_DNA.
DR   RefSeq; WP_011620131.1; NC_008319.1.
DR   AlphaFoldDB; Q0I803; -.
DR   SMR; Q0I803; -.
DR   STRING; 64471.sync_2221; -.
DR   EnsemblBacteria; ABI47337; ABI47337; sync_2221.
DR   KEGG; syg:sync_2221; -.
DR   eggNOG; COG4251; Bacteria.
DR   HOGENOM; CLU_144073_0_0_3; -.
DR   OMA; NEFKGVY; -.
DR   OrthoDB; 1999883at2; -.
DR   Proteomes; UP000001961; Chromosome.
DR   GO; GO:0007623; P:circadian rhythm; IEA:UniProtKB-UniRule.
DR   GO; GO:0042326; P:negative regulation of phosphorylation; IEA:InterPro.
DR   CDD; cd02978; KaiB_like; 1.
DR   HAMAP; MF_01835; KaiB; 1.
DR   InterPro; IPR013474; Circ_KaiB.
DR   InterPro; IPR039022; KaiB-like.
DR   InterPro; IPR011649; KaiB_domain.
DR   InterPro; IPR036249; Thioredoxin-like_sf.
DR   PANTHER; PTHR41709; PTHR41709; 1.
DR   Pfam; PF07689; KaiB; 1.
DR   SMART; SM01248; KaiB; 1.
DR   SUPFAM; SSF52833; SSF52833; 1.
DR   TIGRFAMs; TIGR02654; circ_KaiB; 1.
PE   3: Inferred from homology;
KW   Biological rhythms; Reference proteome.
FT   CHAIN           1..119
FT                   /note="Circadian clock protein KaiB"
FT                   /id="PRO_1000070464"
SQ   SEQUENCE   119 AA;  13292 MW;  91390F268E2E7D4A CRC64;
     MSPRKTYILK LYVAGNTPNS MRALKTLRNI LETEFKGVYA LKVIDVLKNP QLAEEDKILA
     TPTLSKILPP PVRRIIGDLS DRERVLIGLD LLYDELVDND LNSSLMDALG VPDIEEADS
 
 
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