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INHA_MYCTO
ID   INHA_MYCTO              Reviewed;         269 AA.
AC   P9WGR0; F2GEM2; P0A5Y6; P46533; Q540M9;
DT   16-APR-2014, integrated into UniProtKB/Swiss-Prot.
DT   16-APR-2014, sequence version 1.
DT   03-AUG-2022, entry version 50.
DE   RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000250|UniProtKB:P9WGR1};
DE            Short=ENR {ECO:0000250|UniProtKB:P9WGR1};
DE            Short=Enoyl-ACP reductase {ECO:0000250|UniProtKB:P9WGR1};
DE            EC=1.3.1.9 {ECO:0000250|UniProtKB:P9WGR1};
DE   AltName: Full=FAS-II enoyl-ACP reductase {ECO:0000250|UniProtKB:P9WGR1};
DE   AltName: Full=NADH-dependent 2-trans-enoyl-ACP reductase {ECO:0000250|UniProtKB:P9WGR1};
GN   Name=inhA {ECO:0000312|EMBL:AAK45796.1}; OrderedLocusNames=MT1531;
OS   Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycobacterium; Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=83331;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CDC 1551 / Oshkosh;
RX   PubMed=12218036; DOI=10.1128/jb.184.19.5479-5490.2002;
RA   Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O.,
RA   Peterson J.D., DeBoy R.T., Dodson R.J., Gwinn M.L., Haft D.H., Hickey E.K.,
RA   Kolonay J.F., Nelson W.C., Umayam L.A., Ermolaeva M.D., Salzberg S.L.,
RA   Delcher A., Utterback T.R., Weidman J.F., Khouri H.M., Gill J., Mikula A.,
RA   Bishai W., Jacobs W.R. Jr., Venter J.C., Fraser C.M.;
RT   "Whole-genome comparison of Mycobacterium tuberculosis clinical and
RT   laboratory strains.";
RL   J. Bacteriol. 184:5479-5490(2002).
RN   [2]
RP   DRUG TARGET, AND DRUG RESISTANCE.
RC   STRAIN=CDC 1551 / Oshkosh;
RX   PubMed=12406221; DOI=10.1046/j.1365-2958.2002.03162.x;
RA   Larsen M.H., Vilcheze C., Kremer L., Besra G.S., Parsons L., Salfinger M.,
RA   Heifets L., Hazbon M.H., Alland D., Sacchettini J.C., Jacobs W.R. Jr.;
RT   "Overexpression of inhA, but not kasA, confers resistance to isoniazid and
RT   ethionamide in Mycobacterium smegmatis, M. bovis BCG and M. tuberculosis.";
RL   Mol. Microbiol. 46:453-466(2002).
CC   -!- FUNCTION: Enoyl-ACP reductase of the type II fatty acid syntase (FAS-
CC       II) system, which is involved in the biosynthesis of mycolic acids, a
CC       major component of mycobacterial cell walls. Catalyzes the NADH-
CC       dependent reduction of the double bond of 2-trans-enoyl-[acyl-carrier
CC       protein], an essential step in the fatty acid elongation cycle of the
CC       FAS-II pathway. Shows preference for long-chain fatty acyl thioester
CC       substrates (>C16), and can also use 2-trans-enoyl-CoAs as alternative
CC       substrates. The mycobacterial FAS-II system utilizes the products of
CC       the FAS-I system as primers to extend fatty acyl chain lengths up to
CC       C56, forming the meromycolate chain that serves as the precursor for
CC       final mycolic acids. {ECO:0000250|UniProtKB:P9WGR1}.
CC   -!- FUNCTION: Is the primary target of the first-line antitubercular drug
CC       isoniazid (INH) and of the second-line drug ethionamide (ETH).
CC       Overexpressed inhA confers INH and ETH resistance to M.tuberculosis
CC       (PubMed:12406221). The mechanism of isoniazid action against InhA is
CC       covalent attachment of the activated form of the drug to the
CC       nicotinamide ring of NAD and binding of the INH-NAD adduct to the
CC       active site of InhA. Similarly, the ETH-NAD adduct binds InhA (By
CC       similarity). {ECO:0000250|UniProtKB:P9WGR1,
CC       ECO:0000269|PubMed:12406221}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] +
CC         H(+) + NADH; Xref=Rhea:RHEA:10240, Rhea:RHEA-COMP:9925, Rhea:RHEA-
CC         COMP:9926, ChEBI:CHEBI:15378, ChEBI:CHEBI:57540, ChEBI:CHEBI:57945,
CC         ChEBI:CHEBI:78784, ChEBI:CHEBI:78785; EC=1.3.1.9;
CC         Evidence={ECO:0000250|UniProtKB:P9WGR1};
CC       PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:10242;
CC         Evidence={ECO:0000250|UniProtKB:P9WGR1};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 2,3-saturated acyl-CoA + NAD(+) = a (2E)-enoyl-CoA + H(+) +
CC         NADH; Xref=Rhea:RHEA:18177, ChEBI:CHEBI:15378, ChEBI:CHEBI:57540,
CC         ChEBI:CHEBI:57945, ChEBI:CHEBI:58856, ChEBI:CHEBI:65111;
CC         Evidence={ECO:0000250|UniProtKB:P9WGR1};
CC       PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:18179;
CC         Evidence={ECO:0000250|UniProtKB:P9WGR1};
CC   -!- ACTIVITY REGULATION: InhA activity is controlled via phosphorylation:
CC       phosphorylation on Thr-266 decreases InhA activity (5-fold reduction)
CC       and likely negatively regulates biosynthesis of mycolic acids and
CC       growth of the bacterium. The antitubercular pro-drug isoniazid (INH) is
CC       oxidatively activated by the catalase-peroxidase KatG and then
CC       covalently binds NAD to form an adduct that inhibits the activity of
CC       InhA. The inhibitory adduct is the isonicotinic-acyl-NADH where the
CC       isonicotinic-acyl group replaces the 4S (and not the 4R) hydrogen of
CC       NADH. Similarly, the antitubercular pro-drugs ethionamide (ETH) and
CC       prothionamide (PTH) are activated by the flavoprotein monooxygenase
CC       EthA, and forms an adduct with NAD (ETH-NAD and PTH-NAD, respectively)
CC       that is a tight-binding inhibitor of InhA. Is inhibited by triclosan
CC       and derivatives, pyrazole derivative Genz-8575, indole-5-amide Genz-
CC       10850, alkyl diphenyl/diaryl ethers, pyrrolidine carboxamides,
CC       arylamides, pyridomycin, methyl-thiazoles, 4-hydroxy-2-pyridones, and
CC       N-benzyl-4-((heteroaryl)methyl)benzamides. Pyridomycin shows a unique
CC       mode of InhA inhibition by simultaneously blocking parts of the NADH
CC       and the lipid substrate-binding pocket of InhA. Is also inhibited by
CC       thiadiazole compounds, that have very attractive antitubercular
CC       properties. {ECO:0000250|UniProtKB:P9WGR1}.
CC   -!- PATHWAY: Lipid metabolism; mycolic acid biosynthesis.
CC       {ECO:0000250|UniProtKB:P9WGR1}.
CC   -!- SUBUNIT: Homodimer. Homotetramer. {ECO:0000250|UniProtKB:P9WGR1}.
CC   -!- PTM: Is phosphorylated on Thr-266 in vivo. In vitro, can be
CC       phosphorylated by multiple Ser/Thr protein kinases (STPK) such as PknA,
CC       PknB, PknE, PknH and PknL. Phosphorylation decreases enzymatic
CC       activity. {ECO:0000250|UniProtKB:P9WGR1}.
CC   -!- MISCELLANEOUS: Many isoniazid- and ethionamide-resistant clinical
CC       isolates contain mutations within the inhA locus. Resistance to
CC       isoniazid and ethionamide can be conferred by the single substitution
CC       of alanine for serine 94; this drug resistance seems to be directly
CC       related to a perturbation in the hydrogen-bonding network that
CC       decreases the binding of NADH and the INH-NAD adduct.
CC       {ECO:0000250|UniProtKB:P9WGR1}.
CC   -!- SIMILARITY: Belongs to the short-chain dehydrogenases/reductases (SDR)
CC       family. FabI subfamily. {ECO:0000305}.
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DR   EMBL; AE000516; AAK45796.1; -; Genomic_DNA.
DR   PIR; G70710; G70710.
DR   RefSeq; WP_003407553.1; NZ_KK341227.1.
DR   AlphaFoldDB; P9WGR0; -.
DR   SMR; P9WGR0; -.
DR   EnsemblBacteria; AAK45796; AAK45796; MT1531.
DR   GeneID; 45425463; -.
DR   KEGG; mtc:MT1531; -.
DR   PATRIC; fig|83331.31.peg.1646; -.
DR   HOGENOM; CLU_010194_10_1_11; -.
DR   UniPathway; UPA00915; -.
DR   Proteomes; UP000001020; Chromosome.
DR   GO; GO:0004318; F:enoyl-[acyl-carrier-protein] reductase (NADH) activity; IEA:UniProtKB-EC.
DR   GO; GO:0016631; F:enoyl-[acyl-carrier-protein] reductase activity; IEA:UniProtKB-EC.
DR   GO; GO:0050343; F:trans-2-enoyl-CoA reductase (NAD+) activity; IEA:RHEA.
DR   GO; GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.
DR   GO; GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
DR   CDD; cd05372; ENR_SDR; 1.
DR   InterPro; IPR014358; Enoyl-ACP_Rdtase_NADH.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   PANTHER; PTHR43159; PTHR43159; 1.
DR   PIRSF; PIRSF000094; Enoyl-ACP_rdct; 1.
DR   SUPFAM; SSF51735; SSF51735; 1.
PE   3: Inferred from homology;
KW   Antibiotic resistance; Fatty acid biosynthesis; Fatty acid metabolism;
KW   Lipid biosynthesis; Lipid metabolism; NAD; Oxidoreductase; Phosphoprotein.
FT   CHAIN           1..269
FT                   /note="Enoyl-[acyl-carrier-protein] reductase [NADH]"
FT                   /id="PRO_0000428318"
FT   BINDING         20..21
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   BINDING         64..65
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   BINDING         95..96
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   BINDING         158
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   BINDING         165
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   BINDING         194
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   SITE            149
FT                   /note="May act as an intermediate that passes the hydride
FT                   ion from NADH to the substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   SITE            158
FT                   /note="Transition state stabilizer"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
FT   MOD_RES         266
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:P9WGR1"
SQ   SEQUENCE   269 AA;  28528 MW;  F161D6D6A631CA08 CRC64;
     MTGLLDGKRI LVSGIITDSS IAFHIARVAQ EQGAQLVLTG FDRLRLIQRI TDRLPAKAPL
     LELDVQNEEH LASLAGRVTE AIGAGNKLDG VVHSIGFMPQ TGMGINPFFD APYADVSKGI
     HISAYSYASM AKALLPIMNP GGSIVGMDFD PSRAMPAYNW MTVAKSALES VNRFVAREAG
     KYGVRSNLVA AGPIRTLAMS AIVGGALGEE AGAQIQLLEE GWDQRAPIGW NMKDATPVAK
     TVCALLSDWL PATTGDIIYA DGGAHTQLL
 
 
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