IMND2_ENTGE
ID IMND2_ENTGE Reviewed; 402 AA.
AC C9A1P5;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 03-NOV-2009, sequence version 1.
DT 03-AUG-2022, entry version 42.
DE RecName: Full=D-galactonate dehydratase family member EGBG_02030;
GN ORFNames=EGBG_02030;
OS Enterococcus gallinarum (strain EG2).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae;
OC Enterococcus.
OX NCBI_TaxID=565653;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EG2;
RG The Broad Institute Genome Sequencing Platform;
RA Feldgarden M., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L.,
RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M.,
RA Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C.,
RA Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A.,
RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Walk T.,
RA White J., Yandava C., Gilmore M., Manson J., Palmer K., Carniol K.,
RA Lander E., Nusbaum C., Galagan J., Birren B.;
RT "The genome sequence of Enterococcus gallinarum strain EG2 (1,134,897).";
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP FUNCTION, AND LACK OF D-MANNONATE DEHYDRATASE ACTIVITY.
RC STRAIN=EG2;
RX PubMed=24697546; DOI=10.1021/bi500264p;
RA Wichelecki D.J., Balthazor B.M., Chau A.C., Vetting M.W., Fedorov A.A.,
RA Fedorov E.V., Lukk T., Patskovsky Y.V., Stead M.B., Hillerich B.S.,
RA Seidel R.D., Almo S.C., Gerlt J.A.;
RT "Discovery of function in the enolase superfamily: D-mannonate and D-
RT gluconate dehydratases in the D-mannonate dehydratase subgroup.";
RL Biochemistry 53:2722-2731(2014).
CC -!- FUNCTION: Has no detectable activity with D-mannonate and with a panel
CC of 70 other acid sugars (in vitro), in spite of the conservation of the
CC residues that are expected to be important for catalytic activity and
CC cofactor binding. May have evolved a divergent function.
CC {ECO:0000269|PubMed:24697546}.
CC -!- SIMILARITY: Belongs to the mandelate racemase/muconate lactonizing
CC enzyme family. GalD subfamily. {ECO:0000305}.
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DR EMBL; GG670289; EEV33428.1; -; Genomic_DNA.
DR RefSeq; WP_003127878.1; NZ_GG670289.1.
DR AlphaFoldDB; C9A1P5; -.
DR SMR; C9A1P5; -.
DR STRING; 565653.EGBG_02030; -.
DR EnsemblBacteria; EEV33428; EEV33428; EGBG_02030.
DR eggNOG; COG4948; Bacteria.
DR HOGENOM; CLU_030273_6_1_9; -.
DR Proteomes; UP000003059; Unassembled WGS sequence.
DR GO; GO:0000287; F:magnesium ion binding; ISS:UniProtKB.
DR GO; GO:0009063; P:cellular amino acid catabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.120; -; 1.
DR Gene3D; 3.30.390.10; -; 1.
DR InterPro; IPR034589; D-mannonate_dehydratase-like.
DR InterPro; IPR036849; Enolase-like_C_sf.
DR InterPro; IPR029017; Enolase-like_N.
DR InterPro; IPR029065; Enolase_C-like.
DR InterPro; IPR018110; Mandel_Rmase/mucon_lact_enz_CS.
DR InterPro; IPR013342; Mandelate_racemase_C.
DR InterPro; IPR034593; Mandelate_racemase_DgoD-like.
DR InterPro; IPR013341; Mandelate_racemase_N_dom.
DR PANTHER; PTHR48080; PTHR48080; 1.
DR PANTHER; PTHR48080:SF6; PTHR48080:SF6; 1.
DR Pfam; PF13378; MR_MLE_C; 1.
DR Pfam; PF02746; MR_MLE_N; 1.
DR SMART; SM00922; MR_MLE; 1.
DR SUPFAM; SSF51604; SSF51604; 1.
DR SUPFAM; SSF54826; SSF54826; 1.
DR PROSITE; PS00908; MR_MLE_1; 1.
PE 3: Inferred from homology;
KW Magnesium; Metal-binding.
FT CHAIN 1..402
FT /note="D-galactonate dehydratase family member EGBG_02030"
FT /id="PRO_0000429909"
FT BINDING 207
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 209
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 233
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 259
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 259
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 280
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 309
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 336
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
SQ SEQUENCE 402 AA; 44802 MW; B3C40986A0491484 CRC64;
MMKALVIEDI KVITTAPEGI NLVAVKVTTN DPSIYGVGCA TFTQRYEVVV TAIDKYLKPF
LIGKDPQRIE DIWRTASVSS YWRNGPVLNN ALSGIDMALW DIKGKLANMP LYQLFGGKVR
DAVPAYIHAD AQSVSDAVEL VQTRVDQGWK QIRVQIGGYG GNNQAMHLPK DNTPGVYYDP
DVYMKTMIEG FEKLREKFGD SIKLCHDVHE RLSPSEAVKF ANQLEKFDLL FLEDALPPEQ
VQWFEHLRSH TNIPLAMGEL FNNPHEWTGL IQNRTIDYLR LHLSQVGGIT PTRKIISLAD
AYGVRTAWHG PGDMTGIGHA VNTHLSITST NFGIQEWSCS IKENTYKVFP GTPVAKDGYI
YLNDQPGIGV DIDEEAAAAF PTHDRMADWT LCRLPDGSAG RP