GFI1B_XENLA
ID GFI1B_XENLA Reviewed; 343 AA.
AC Q6DCW1;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Zinc finger protein Gfi-1b;
DE AltName: Full=Growth factor independent protein 1B;
GN Name=gfi1b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Spleen;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Essential transcriptional regulator necessary for development
CC and differentiation of erythroid and megakaryocytic lineages. Alters
CC histone methylation by recruiting histone methyltransferase to target
CC genes promoters. Plays a role in heterochromatin formation (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- DOMAIN: The zinc finger domain is essential for erythroid expansion and
CC acts as an activation domain whereas non finger domain serves as
CC repression domain. {ECO:0000250}.
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DR EMBL; BC077878; AAH77878.1; -; mRNA.
DR RefSeq; NP_001087000.1; NM_001093531.1.
DR AlphaFoldDB; Q6DCW1; -.
DR SMR; Q6DCW1; -.
DR DNASU; 446835; -.
DR GeneID; 446835; -.
DR KEGG; xla:446835; -.
DR CTD; 446835; -.
DR Xenbase; XB-GENE-944429; gfi1b.L.
DR OrthoDB; 1318335at2759; -.
DR Proteomes; UP000186698; Chromosome 8L.
DR Bgee; 446835; Expressed in liver and 11 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 4.
DR SMART; SM00355; ZnF_C2H2; 6.
DR SUPFAM; SSF57667; SSF57667; 4.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 6.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 6.
PE 2: Evidence at transcript level;
KW Chromatin regulator; Developmental protein; DNA-binding; Metal-binding;
KW Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..343
FT /note="Zinc finger protein Gfi-1b"
FT /id="PRO_0000306330"
FT ZN_FING 176..199
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 205..227
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 233..255
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 261..283
FT /note="C2H2-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 289..311
FT /note="C2H2-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 317..340
FT /note="C2H2-type 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 1..20
FT /note="Mediates repression of transcription"
FT /evidence="ECO:0000250"
FT REGION 1..20
FT /note="SNAG domain"
FT /evidence="ECO:0000250"
FT REGION 51..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 60..77
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 343 AA; 39227 MW; 77ACD7B606B79FD1 CRC64;
MPRSFLVKSK KTHTYNQHRY VEEQPVTGVD LVATVYHAHC TECPAEFPAF STDPTEKQHT
PENVITEEAR SDPGDPREKI PFLSRSISPN SFQGIALSSM RPLKHYDPSP LSAFYTQNFS
WDALHSTYGF KQIPSHIHPS MLQNSINLYS CPPRVDSDSD HPINYSMSYS PKMDTYHCVK
CSKVFSTSHG LEVHVRRSHS GTRPFVCNIC GKSFGHAVSL EQHLNVHSQE RSFECKMCGK
TFKRSSTLST HLLIHSDTRP YPCQFCGKRF HQKSDMKKHT YIHTGEKPHK CQVCGKAFSQ
SSNLITHSRK HTGFKPFSCD LCCKGFQRKV DLRRHRENQH GLK