FRS7_ARATH
ID FRS7_ARATH Reviewed; 764 AA.
AC Q9M8J3;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE 7;
GN Name=FRS7; OrderedLocusNames=At3g06250; ORFNames=F28L1.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP TISSUE SPECIFICITY, INDUCTION, SUBCELLULAR LOCATION, GENE FAMILY, AND
RP NOMENCLATURE.
RX PubMed=15591448; DOI=10.1104/pp.104.052191;
RA Lin R., Wang H.;
RT "Arabidopsis FHY3/FAR1 gene family and distinct roles of its members in
RT light control of Arabidopsis development.";
RL Plant Physiol. 136:4010-4022(2004).
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15591448}. Note=The
CC nuclear localization is independent of the light treatment.
CC -!- TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline
CC leaves, inflorescences stems, flowers and siliques.
CC {ECO:0000269|PubMed:15591448}.
CC -!- INDUCTION: Up-regulated in hypocotyls by far-red light treatment.
CC {ECO:0000269|PubMed:15591448}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family. {ECO:0000305}.
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DR EMBL; AC018907; AAF30318.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74365.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM63662.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM63663.1; -; Genomic_DNA.
DR EMBL; AF360270; AAK25980.1; -; mRNA.
DR EMBL; AY150446; AAN12887.1; -; mRNA.
DR RefSeq; NP_001325737.1; NM_001337643.1.
DR RefSeq; NP_001325738.1; NM_001337642.1.
DR RefSeq; NP_566278.1; NM_111500.3.
DR AlphaFoldDB; Q9M8J3; -.
DR STRING; 3702.AT3G06250.1; -.
DR PaxDb; Q9M8J3; -.
DR PRIDE; Q9M8J3; -.
DR ProteomicsDB; 228956; -.
DR EnsemblPlants; AT3G06250.1; AT3G06250.1; AT3G06250.
DR EnsemblPlants; AT3G06250.2; AT3G06250.2; AT3G06250.
DR EnsemblPlants; AT3G06250.3; AT3G06250.3; AT3G06250.
DR GeneID; 819799; -.
DR Gramene; AT3G06250.1; AT3G06250.1; AT3G06250.
DR Gramene; AT3G06250.2; AT3G06250.2; AT3G06250.
DR Gramene; AT3G06250.3; AT3G06250.3; AT3G06250.
DR KEGG; ath:AT3G06250; -.
DR Araport; AT3G06250; -.
DR TAIR; locus:2082420; AT3G06250.
DR eggNOG; ENOG502QVUN; Eukaryota.
DR HOGENOM; CLU_008459_7_2_1; -.
DR InParanoid; Q9M8J3; -.
DR OMA; NTIGKEW; -.
DR OrthoDB; 145340at2759; -.
DR PhylomeDB; Q9M8J3; -.
DR PRO; PR:Q9M8J3; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M8J3; baseline and differential.
DR Genevisible; Q9M8J3; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669; PTHR31669; 2.
DR Pfam; PF03101; FAR1; 2.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Nucleus; Reference proteome; Repeat; Zinc; Zinc-finger.
FT CHAIN 1..764
FT /note="Protein FAR1-RELATED SEQUENCE 7"
FT /id="PRO_0000363485"
FT DOMAIN 42..118
FT /note="FAR1 1"
FT DOMAIN 204..280
FT /note="FAR1 2"
FT DOMAIN 375..471
FT /note="MULE"
FT ZN_FING 650..686
FT /note="SWIM-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00325"
FT REGION 119..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 764 AA; 87810 MW; 6C7FA0DEE3F73CA3 CRC64;
MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL
YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT GKWVLDQIQK EHNHDLGGHI
EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD
GQTQPKATEP YAGLEFNSAN EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK
EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW
ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH RQPVLLGGAL VADESKEAFS
WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE
FKYEYEKCLY QSQTTVEFDT MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI
HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN
ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT KNAEFGFVRD VESGVTSQDL
KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
