FDL21_ARATH
ID FDL21_ARATH Reviewed; 456 AA.
AC Q9LXJ6; Q08AA0;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 14-OCT-2008, sequence version 2.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=F-box/FBD/LRR-repeat protein At3g52680;
GN OrderedLocusNames=At3g52680; ORFNames=F3C22.80;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB89229.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AL353912; CAB89229.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002686; AEE78979.1; -; Genomic_DNA.
DR EMBL; BT028979; ABI93888.1; -; mRNA.
DR PIR; T49021; T49021.
DR RefSeq; NP_190836.2; NM_115128.4.
DR AlphaFoldDB; Q9LXJ6; -.
DR PaxDb; Q9LXJ6; -.
DR PRIDE; Q9LXJ6; -.
DR EnsemblPlants; AT3G52680.1; AT3G52680.1; AT3G52680.
DR GeneID; 824434; -.
DR Gramene; AT3G52680.1; AT3G52680.1; AT3G52680.
DR KEGG; ath:AT3G52680; -.
DR Araport; AT3G52680; -.
DR TAIR; locus:2083268; AT3G52680.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q9LXJ6; -.
DR OMA; WIVNETI; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9LXJ6; -.
DR PRO; PR:Q9LXJ6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LXJ6; baseline and differential.
DR Genevisible; Q9LXJ6; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..456
FT /note="F-box/FBD/LRR-repeat protein At3g52680"
FT /id="PRO_0000283114"
FT DOMAIN 20..73
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 74..100
FT /note="LRR 1"
FT REPEAT 102..127
FT /note="LRR 2"
FT REPEAT 152..179
FT /note="LRR 3"
FT REPEAT 180..205
FT /note="LRR 4"
FT REPEAT 225..252
FT /note="LRR 5"
FT REPEAT 270..295
FT /note="LRR 6"
FT REPEAT 318..344
FT /note="LRR 7"
FT DOMAIN 358..409
FT /note="FBD"
SQ SEQUENCE 456 AA; 52255 MW; 350DB1E73800A0B1 CRC64;
MISPTMEQGE SLRIRVVMGK DRISELPDGL LLKILSSLPT NIVVATSVLS KQWRSLWKLV
PNLEFDSDDY ESEHYTFSEI VCKSFLSHKA PVLESFRLKF VNFNPVDIGL WVGIAFSRHL
RELVLDFYPA ELGKGVTFTF PSSLCTCNTL ETLKLVLCIL VDIPSPVLMK SLRTLHLEFV
RYKDESSVRN LLSGCPGLEE LRLYRGDDSD IKVFTIEVPS LQRLTIHDNN DGPEFWGYVI
NAPFLKYLLI EELRCPEFCL NAPELVEANI AEVTSITIEK FLGSFTSVSR LLLNLSPLKI
TYPTGSMFYQ LVSLEMYTRE AEWWNLLTLM LENSPKLQVL KLTDRSQNFH KDGLVSGKWN
EPKDVPECLL SQLETFVWRR FDWGREEEKE IATYILKNGR RLKKATFSTN PIESEELNKL
KERRKVLNGL DGVVRASNSC QLVFKFDPSY LGSDSP
