DHR18_ARATH
ID DHR18_ARATH Reviewed; 186 AA.
AC P30185;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=Dehydrin Rab18;
GN Name=RAB18; OrderedLocusNames=At5g66400; ORFNames=K1F13.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia; TISSUE=Leaf;
RX PubMed=1463831; DOI=10.1007/bf00027165;
RA Lang V., Palva E.T.;
RT "The expression of a rab-related gene, rab18, is induced by abscisic acid
RT during the cold acclimation process of Arabidopsis thaliana (L.) Heynh.";
RL Plant Mol. Biol. 20:951-962(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Carpenter C.D., Simon A.E.;
RT "Sequence analysis of a novel dehydration-induced gene encoding a glycine-
RT rich protein from Arabidopsis thaliana.";
RL Submitted (OCT-1992) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=P30185-1; Sequence=Displayed;
CC -!- INDUCTION: By water stress and abscisic acid (ABA) during the cold
CC acclimation process.
CC -!- SIMILARITY: Belongs to the plant dehydrin family. {ECO:0000305}.
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DR EMBL; X68042; CAA48178.1; -; Genomic_DNA.
DR EMBL; L04173; AAA32722.1; -; Genomic_DNA.
DR EMBL; AB013389; BAB10916.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98208.1; -; Genomic_DNA.
DR EMBL; AF428458; AAL16227.1; -; mRNA.
DR EMBL; AY093779; AAM10396.1; -; mRNA.
DR EMBL; BT002226; AAN72237.1; -; mRNA.
DR PIR; S28021; S28021.
DR RefSeq; NP_201441.1; NM_126038.3. [P30185-1]
DR AlphaFoldDB; P30185; -.
DR STRING; 3702.AT5G66400.1; -.
DR PaxDb; P30185; -.
DR PRIDE; P30185; -.
DR ProteomicsDB; 224217; -. [P30185-1]
DR EnsemblPlants; AT5G66400.1; AT5G66400.1; AT5G66400. [P30185-1]
DR GeneID; 836772; -.
DR Gramene; AT5G66400.1; AT5G66400.1; AT5G66400. [P30185-1]
DR KEGG; ath:AT5G66400; -.
DR Araport; AT5G66400; -.
DR TAIR; locus:2154930; AT5G66400.
DR eggNOG; ENOG502S4VW; Eukaryota.
DR HOGENOM; CLU_060028_1_0_1; -.
DR InParanoid; P30185; -.
DR PRO; PR:P30185; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; P30185; baseline and differential.
DR Genevisible; P30185; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005507; F:copper ion binding; IDA:CAFA.
DR GO; GO:0016151; F:nickel cation binding; IDA:CAFA.
DR GO; GO:0009631; P:cold acclimation; IGI:TAIR.
DR GO; GO:0009961; P:response to 1-aminocyclopropane-1-carboxylic acid; IEP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
DR GO; GO:0009414; P:response to water deprivation; IEP:TAIR.
DR DisProt; DP00689; -.
DR InterPro; IPR000167; Dehydrin.
DR InterPro; IPR030513; Dehydrin_CS.
DR PANTHER; PTHR33346; PTHR33346; 2.
DR Pfam; PF00257; Dehydrin; 1.
DR PROSITE; PS00315; DEHYDRIN_1; 1.
DR PROSITE; PS00823; DEHYDRIN_2; 2.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome; Stress response.
FT CHAIN 1..186
FT /note="Dehydrin Rab18"
FT /id="PRO_0000100034"
FT REGION 1..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..25
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 120..142
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 163..186
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 145
FT /note="S -> C (in Ref. 2; AAA32722)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 186 AA; 18464 MW; ADD288AC4F8E1FDF CRC64;
MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG
GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG GLGGMLHRSG SGSSSSSEDD
GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK
LPGGGR
